Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0518 |
Symbol | |
ID | 4440263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 543831 |
End bp | 545513 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639672376 |
Product | trehalose-6-phosphate hydrolase |
Protein accession | YP_814354 |
Protein GI | 116629182 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000559563 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGACGA TGAAGATGAA TGATTGGAAA AAGAAAGCTA TAGTCTATGA GGCATATGTA CAAAGTTTTA ATGATTCAGA TGGTGATGGA ATAGGAGATC TACCTGGTTT AATTGAAAAA CTAGATTATA TAAAGAATTT GGGTGCCAAT GTGATTTGGC TTACGCCAAT TTTTAAATCT CCTCTGGTAG ATAATGGATA TGACATAGCT GATTATGAAG CTATTAACCC GATTTATGGG TCAATGAATG ACTTTAAAAA GTTATTGCAG CAGGCTCATG AAAGAGATCT GAAAATTGTA ATGGATCTTG TTGTTAACCA CACTTCAGAT CAACATAAGT GGTTTAAAGA ATCTAAAAAA AATAGAAATA ATAAATACTC TGACTATTAC ATCTGGCGTG ATCCGAAAGA AGATGGAAGT GCTCCTACGA ATTTGGGCTC AGCATTTGGC GGATCGGCTT GGACTTATGT ACCTGAGCGA AATCAATACT ATTTGCATCT TTTTGCTAAG CAACAACCAG ACTTAAATTG GGATAATCCT CAAGTTCGCA ATGACATTTA TCAAATGATG AAATTCTGGT TGGATATGGG TGTAGACGGA TTTAGAATGG ATTCGATCAG TTTCATTTCC AAACCAAGTA AATTTGAGGA TGCGCCTTTG GAAGATAATA AGGAATATGG TGCATATTAT TATGGCTCTG CTAATGGACC GCATATTCAT GAATATTTAC GTGAAATGAA TCAAAAAGTT CTAAGTAAAT ATGATGTAAT ATCGATTGGA GAAACACCGC ATACCACTGC TAGAGAAGCT CGACTTTTTG TTGAACCCGA TAGACATGAA TTGGATATGG TATTTCAATT TGAACATATG CATGTAGATT ATGGTGAATT TGGTAGGTAT TCAGATGTTA CTTTTAAGAT GAGTGATCTC CGTAATTCAA TGACTAGCTG GCAAAATGAT TTGTCATGGA ATTCAAATTA TTTGGGTAAT CACGATCAAC CACGAATTGT TTCTAGATTT GGAAATGATT CAAAGTATAG AAAAGAATCG GCTAAGATGC TTGCAATGGT ATCTTTATTG CAAAAAGGAA CTCCTTTTAT TTTTCAAGGT GAAGAAATTG GAATGACCAA TTTGCATATT AAAAATATAG ATGAATTAAA AGATCTAGAA GCTCATAATA TATACAGTTT CTTAAAATCT AAAGGTATAT CTGATAAAGA TGCCTTAAAG ATGGTTAATA GAAAAACACG AGATAATGCC CGGACTCCTA TGCAATGGAA TAAGGAGCAA AATGCTGGTT TTTCTAGTGG CAATCCATGG ATAGAAGTAA ATCCAAATTA TTTAGAAATT AACGTAAAGA AAGATTTACA AGATTCAAAT TCAATTTATC GTTTTTATCA AAAGCTTCTA AAATTAAGGA ATAATAATCA GGTGTTGCTT GATGGTAACT ATGATTTAAT TACGCCTGAA GATTCAGCAA TTTTTGCTTA TACTAGGAGT AGTGATAAAG ATAAAGTTGC GGTTATTTGT TCTTTTGTAC CGTATAAGGT TAAATATGAA TTACCTGAAG ATTTTGTAAA CAAAAATAAA GTGATTTTGT CTAACTATGA CGATAGAGAA GATATGGCCT CGAATACAAT CTATTTAAGA CCGTATGAAG GAGTTGTAAT TAAACGTGAG TAA
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Protein sequence | MRTMKMNDWK KKAIVYEAYV QSFNDSDGDG IGDLPGLIEK LDYIKNLGAN VIWLTPIFKS PLVDNGYDIA DYEAINPIYG SMNDFKKLLQ QAHERDLKIV MDLVVNHTSD QHKWFKESKK NRNNKYSDYY IWRDPKEDGS APTNLGSAFG GSAWTYVPER NQYYLHLFAK QQPDLNWDNP QVRNDIYQMM KFWLDMGVDG FRMDSISFIS KPSKFEDAPL EDNKEYGAYY YGSANGPHIH EYLREMNQKV LSKYDVISIG ETPHTTAREA RLFVEPDRHE LDMVFQFEHM HVDYGEFGRY SDVTFKMSDL RNSMTSWQND LSWNSNYLGN HDQPRIVSRF GNDSKYRKES AKMLAMVSLL QKGTPFIFQG EEIGMTNLHI KNIDELKDLE AHNIYSFLKS KGISDKDALK MVNRKTRDNA RTPMQWNKEQ NAGFSSGNPW IEVNPNYLEI NVKKDLQDSN SIYRFYQKLL KLRNNNQVLL DGNYDLITPE DSAIFAYTRS SDKDKVAVIC SFVPYKVKYE LPEDFVNKNK VILSNYDDRE DMASNTIYLR PYEGVVIKRE
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