Gene LGAS_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0513 
Symbol 
ID4440409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp539609 
End bp540694 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content37% 
IMG OID639672371 
Productglutamyl aminopeptidase 
Protein accessionYP_814349 
Protein GI116629177 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1363] Cellulase M and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00116294 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG AACAAGAAAT TGAGATGTTA AAAGAATTCT CTGATGCAAA TTCAACCTCT 
GGATTTGAAG AAGAATTTGT AAAATTATTT TCGACTTATG CTAAAGATAC AGCAGATATT
ACTGTTGATG GGATGCTTAA TGTGTATGCT GCAAAGAAGG AAAATAAGGG AGATCGTCCT
GTAATTCAAA TGGATGCACA CTCTGATGCG GTAGGCTTTA TCACGCAAGC AGTTAGACCA
AATGGGTTAA TCAAATTCGT TCCACTTGGT GGCTGGGTAA AATATAATAT TCCTGCATTA
AAAGTAAAAA TTAAAAATCG CGATGGCGAG TATATTCCCG GTGTAGTTGC TACTAAGCCA
CCACATTTCA TGACTGCAGC TGAAAGAAAT TCAATTCCAG AAGTAGCTGA CATGTCAATT
GATGTTGGCT CATCAAGTAG AGAAGAAACA ATTAAAGATT ACAAAATTGA TACGGGTTGC
CCAATTTTTG TAGATGTAAA ATGCGAATAT CATGAAAAAT CAGGTCTTTT CTTTGGTAAA
GATTTTGATG ATCGTTTTGG TGCTGGTGCA ATGATTGGCG TTTTAGATAA TTTAAAAGGT
GAGGAAACTA ATTTTGATGT TGTAGCTGCC TTATCAAGTC AAGAAGAAGT TGGTCTTCGC
GGAGCATATG TGACTGGAAG AAAAATTAAG CCTGATTTAT GTATAGTGCT TGAGAGTTGT
CCAGCAGACG ATACTTTTGA GCCAGAGTGG TTATCTCAAA CTGGATTGAA GCGTGGACCA
ATGTTAAGAG ATATGGATAC GACATTTTTA CCGAATCCTA AATTCCAGCA ATATGCTTGT
GATTTAGCAG ATAAAAATGG CATTCCATAT ACTCGCTCAG TGAGAACTGG TGGAGGACAA
GATGGAGCCG CAATTTACTA CGAATATGGT GCGCCAACAA TCGTAATTGG AATTCCAGTA
CGTTATGAAC ATTCACCATA TTGTTTCTCT GCATATAAAG ACTTTAAGGC ATCAGTGGAT
CTAGCAACTG CGATTATTCG TGATATGACG AAAGAAAAGT TAGATAGTTT TAAGAAGGTG
ATTTAA
 
Protein sequence
MKKEQEIEML KEFSDANSTS GFEEEFVKLF STYAKDTADI TVDGMLNVYA AKKENKGDRP 
VIQMDAHSDA VGFITQAVRP NGLIKFVPLG GWVKYNIPAL KVKIKNRDGE YIPGVVATKP
PHFMTAAERN SIPEVADMSI DVGSSSREET IKDYKIDTGC PIFVDVKCEY HEKSGLFFGK
DFDDRFGAGA MIGVLDNLKG EETNFDVVAA LSSQEEVGLR GAYVTGRKIK PDLCIVLESC
PADDTFEPEW LSQTGLKRGP MLRDMDTTFL PNPKFQQYAC DLADKNGIPY TRSVRTGGGQ
DGAAIYYEYG APTIVIGIPV RYEHSPYCFS AYKDFKASVD LATAIIRDMT KEKLDSFKKV
I