| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0501 |
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| Symbol | |
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| ID | 4440397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 525553 |
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| End bp | 527250 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639672359 |
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| Product | cellobiose-specific PTS system IIC component |
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| Protein accession | YP_814337 |
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| Protein GI | 116629165 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1440] Phosphotransferase system cellobiose-specific component IIB
[COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00394] phosphotransferase system, lactose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component
[TIGR00853] PTS system, lactose/cellobiose family IIB component |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 96 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGGTT TTACCAAAGC AATGGATAAA ATGAAGCCAA AATTCGAAAA AATAGCGGCT
AATCCATATG TTTCAGCAGT TCGTGACGGC TTTATTGCTG CCATGCCAAT TATTTTGTTT
TCAAGTTTGT TTACGCTGAT TGCATATGTA CCAAACGCAT GGGGATTTTA TTGGCCGAAG
GCAGTAGAAA ACGCATTGGT TTTGCCTTAT AGCTATTCAA TGGGTTTGCT TGCTTTATAT
GTAACTGCAA CTTGTGCGAA GAATTTAACT GATTATAAGA ACTTAAAGCT TCCTAAGACA
AACCAGATTA ATCCAATGAA CGTTATCTTA GCTGCTGAAA TTTCATTCAT TATTATTGCT
ATTAAAGTTG GTAAAAATGG ATTAGATTTA ACTTACTTAG GTACGCAAGG ATTAATCGCT
TCATATATTG TTGGTTTAAT CGTACCTAAC ATTTACTATG CATGTGTTAA GAACAATGTA
ACTATTAAAA TGCCTGATGT TGTACCACAG AACATTGCTC AAACATTTAA AGACATTTTC
CCAACGACTT TCTCAGTTGC ATTGTTCTGG ATAGTTCAAA TTATTTTAAA CCAACTCTTT
GGTGCAAACT TATCAGAATG TGTAGTAAAG GTTCTTTCAC CATTATTCCA CGCAAGTGAT
ACTTACGGTG GTTTAGCATT AGTTGCTGGT GCGATGGCAT TCTTCTGGTT TGTTGGTGTG
CAAGGTCCTT CAATTGTTGC TCCAGCCGTA GCCGCAATTG AAACCACTAA TGTTGGTTTG
AACCAACAAT TAGTTCATGC TGGAATGCAA GCAAGTCATG CTTTAACTAT TAACTGTCAA
GACTACGTTA TGAACATGGG TGGTACTGGA TCAACTTTCG TAGTTCCATT CATCTTCTTA
CTTTTAGCTA AATCAGCTCA AAACAAAGCC GCTGGTAAAG CCGCTGTTAT TCCTGGATGT
TTCTCAGTTA ACGAACCTAT TTTGTTTGGT GCTCCAATTA TCATGAACCC AGTATTCTTC
ATTCCATTTT TGGTAACACC AATGTTCAAT GTTTGTGCTT ATAAATTCTT TGTTCAAGTT
CTTCACATGA ACGCTTTATA CAACACATTA CCTTGGACTG TTCCAGCTCC AATTGGTATT
ATCGTATCTT CTGGTTTTGC TGGTTTATCA TTTGTTTATG TAATTTTAAC TTTAGTTGTT
GATACTTTAA TTTGGATTCC ATTCTTTAAG TTTTACGACA ACGATTTGTA CAAGCAAGAA
CAAGCTAAGC TTGCTGCAGA AAAAGCTGCT GGTGTAGCTA CTGCTACTGA TGATTCAACT
GCTAGTCTTG CAGCTACTGA CAAAGAAGCT AAGGAAGGTA TTACTAAAGA TACTAACGTA
ATGGTTATCT GTGCCGGTGG TGGTACTTCA GGTATCTTAG CTAAGGCTTT AAACAAGATG
GCTAAAGAAC GTAACTTACC ACTTCACGCA GCTGCTCGTG CTTATGGTCA ACACATGGAT
ATTATTCATG ACATGGACTT GATTATTTTG GCTCCACAGA TGGATAGTAT GAAGGATAAC
TTGAAAGAAA TTGCTGATCA TGATGGTTCT AAATTAGTCA CTACTACTGG ACGTCAGTAC
ATTGAATTAA CTCAAAAACC TGATTTAGCA TTTAAGTTTG TTGTTGATAG CCTTGAAGGC
AAGAATGAAG ATAAGTAA
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| Protein sequence | MNGFTKAMDK MKPKFEKIAA NPYVSAVRDG FIAAMPIILF SSLFTLIAYV PNAWGFYWPK
AVENALVLPY SYSMGLLALY VTATCAKNLT DYKNLKLPKT NQINPMNVIL AAEISFIIIA
IKVGKNGLDL TYLGTQGLIA SYIVGLIVPN IYYACVKNNV TIKMPDVVPQ NIAQTFKDIF
PTTFSVALFW IVQIILNQLF GANLSECVVK VLSPLFHASD TYGGLALVAG AMAFFWFVGV
QGPSIVAPAV AAIETTNVGL NQQLVHAGMQ ASHALTINCQ DYVMNMGGTG STFVVPFIFL
LLAKSAQNKA AGKAAVIPGC FSVNEPILFG APIIMNPVFF IPFLVTPMFN VCAYKFFVQV
LHMNALYNTL PWTVPAPIGI IVSSGFAGLS FVYVILTLVV DTLIWIPFFK FYDNDLYKQE
QAKLAAEKAA GVATATDDST ASLAATDKEA KEGITKDTNV MVICAGGGTS GILAKALNKM
AKERNLPLHA AARAYGQHMD IIHDMDLIIL APQMDSMKDN LKEIADHDGS KLVTTTGRQY
IELTQKPDLA FKFVVDSLEG KNEDK
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