Gene LGAS_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0496 
Symbol 
ID4440392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp521900 
End bp522262 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content36% 
IMG OID639672354 
Productphosphotransferase system, galacitol-specific IIB component 
Protein accessionYP_814332 
Protein GI116629160 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3414] Phosphotransferase system, galactitol-specific IIB component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00000112028 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAATTT TAAGCAAGAA TAGGAAGATA TTTTGGGAGG TATTTATTAT GGCAAAGGAA 
GTTAAGTTAT TAGCTGCATG TGGTGCAGGG GTTAACTCTT CTCACCAAAT TAAGGATGCT
GTTGAAGAAG AAATGAAGAA ACGTGGACAC AACGTTCATG TTGATGCTGT GATGATTAAG
GATGTAAACG AAGATATGCT TAATCACTAC GATGCATATT TAACCATTGC TAAGACTGAT
TTAGCATTTC AACCTAAGAT TCCTTTAATT GAAGCAGGTC CAATTCTTTA CAGAATTCCA
GCAATGGCTC AACCTGTTTA TGACAAGGTT GAAGAAGTAG TTAAAAAGGT AGAAAACGAA
TAG
 
Protein sequence
MRILSKNRKI FWEVFIMAKE VKLLAACGAG VNSSHQIKDA VEEEMKKRGH NVHVDAVMIK 
DVNEDMLNHY DAYLTIAKTD LAFQPKIPLI EAGPILYRIP AMAQPVYDKV EEVVKKVENE