| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0439 |
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| Symbol | |
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| ID | 4438843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 468386 |
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| End bp | 469783 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639672297 |
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| Product | dipeptidase PepV |
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| Protein accession | YP_814282 |
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| Protein GI | 116629110 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01886] dipeptidase PepV
[TIGR01887] dipeptidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGAAC TAAATTATAA AAAATTAGCA CAAGAAAAGA AAGATGCTAT TTTAAATGAT
TTAAAAGAAT TGATTGCAAT TGATTCTTCT GAAGATTTAA ACAATACTAG CAAAGAATAT
CCTGTAGGTC CTGGCCCAGT GAAGGCTATG AAGAAGTTTT TATCATTTGC TAAACGTGAC
GGCTTTGATA CTGAAAACTT TGATAACTAT GCTGGTCGAA TCAACATGGG TTCTGGCGAC
AAACGCGTTG GTATTATCGG CCACATGGAT GTCGTTCCTG CTGGCGAAGG CTGGAAAACT
GATCCATTTA AGATGACTAT TAAAGATGGC AAAATTTATG GGCGTGGTAG TGCTGATGAT
AAAGGCCCAT CCTTAGCAGC TTACTATGGC ATGCTGATTT TAAAAGAGCA TGGCTTTAAA
CCTAAAAAGA AAATTGACTT CGTAGTTGGA ACTAATGAAG AAACTAACTG GGTTGGAATT
GACTATTACT TAAAGCATCA ACCAGCTCCA GATGTTGCTT TCTCTCCTGA CGCAGAATTT
CCAATTATCA ATGGTGAACA AGGCATTGTT ACCTTAAAAC TTGACTTTAA AGATGACCCA
AGCCAAGGCG ATGTTAAACT TTGGACATTC CAATCAGGAA TTGCAACTAA TGTTATCCCT
CAAACAGCTC ATGCTCAACT TGAAGGCGAT ATCGATGGCA TCAAAGAAAA GTTCAACTTA
TTCCTGAAAG AGCATAAGCT TGAAGGAAAG GCAGAAATGC TTAGCGGCCG TCTTTCATTA
ACTTTAACCG GTCATGGTGC TCATGCTTCT GCTCCTGAAA CTGGTAGAAA TGCTGCTACT
TACCTTGCTC TCTTCCTTGA TAGCCTTAAC TTTGACGGTC AAGCGAAGAA TTTCTTACAC
TTCCTTGCAA CTGTTGAACA CAAAGACTTT AACGGTAAGA AATTAGGTAT TTTCCATCAT
GACGACTTAA TGGGCGACCT AACTAGTTCA CCAAGTATGT TTAACTTTGA AGGTCAAAAC
GCATACCTAT TAAACAATGT TCGCTACCCA CAAGGTATTG AGCCAGAAGA AATGGTTAAA
AATATTAACG AAAAATTCGG CGATATCTTA GACGCCAGAA TTGATGGTTC AGCAGAAGCT
CCTCATTACG TTCCTGGAGA CGATCCAATT GTTAAGACCC TGCTTTCAGT TTATGAAAAG
CAAACTGGTA AGAAAGGTCA CGAAGTTATC ATTGGTGGCG GAACATATGG CCGTTTATTC
AAACATGGTG TAGCCTTTGG TGCTCAACCA GAAGGTGCTC CACTTGTTAT GCACCAACCA
AATGAATACA TGAAGGTTGA CGATTTAATT AATTCAATTG CTATTTATGC CGAAGCAATC
TATGAATTAA CTAAATAA
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| Protein sequence | MEELNYKKLA QEKKDAILND LKELIAIDSS EDLNNTSKEY PVGPGPVKAM KKFLSFAKRD
GFDTENFDNY AGRINMGSGD KRVGIIGHMD VVPAGEGWKT DPFKMTIKDG KIYGRGSADD
KGPSLAAYYG MLILKEHGFK PKKKIDFVVG TNEETNWVGI DYYLKHQPAP DVAFSPDAEF
PIINGEQGIV TLKLDFKDDP SQGDVKLWTF QSGIATNVIP QTAHAQLEGD IDGIKEKFNL
FLKEHKLEGK AEMLSGRLSL TLTGHGAHAS APETGRNAAT YLALFLDSLN FDGQAKNFLH
FLATVEHKDF NGKKLGIFHH DDLMGDLTSS PSMFNFEGQN AYLLNNVRYP QGIEPEEMVK
NINEKFGDIL DARIDGSAEA PHYVPGDDPI VKTLLSVYEK QTGKKGHEVI IGGGTYGRLF
KHGVAFGAQP EGAPLVMHQP NEYMKVDDLI NSIAIYAEAI YELTK
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