Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0429 |
Symbol | |
ID | 4438867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 456578 |
End bp | 457429 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639672287 |
Product | glutamate racemase |
Protein accession | YP_814272 |
Protein GI | 116629100 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.13208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 104 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAGGAGA AAAGAGATTT TAATCATCAT TTGTTTAAAG GAGTTTTTTT AATGGATAAT CGACCAATTG GAGTTTTAGA TTCAGGCTTA GGTGGCTTAA CTGTTTTAAA AAAAGTAATT GAGAAGATGC CTAACGAATC AACTATTTTT ATTGGTGACC AGGCTAATAT GCCCTATGGA GATCGCTCAA AAGAAGAGAT TATTTCTTTA ACTCGCGACA GTGTAAACTT CTTATTAAGT AAAGATGTAA AGATTATTAT TTTTGGTTGC AATACTGCCA CTGCGGTTGC AATGTCTACT ATTAAAAAAG AAATTCCTTT GCAAATAATT GGAGTAGTTC AATCTGGTGC CTTAGCTGCA GCTAGAACCA CAGAAACAAA GAATGTTGCG GTAATTGGTA CTAAGGCAAC TGTTAATAGT CATTCTTATT TAAAAGAAAT TCAATATCGT GATCCAAAAA TTCAAGTAAG CGAATTTGCA CAACCTAAAT TAGCGCCTCT TGCTGAGGAG GATCCTGCTG AAGAGATTAA GCAGGCTGTG GTCAGCGAAA GCTTAGCGCC GTTGAAAAAG GCTGATTACG ATACCCTTGT TTTAGGATGC ACCCATTATC CATTATTAAG AAAGGAAATT GTTGCAGTGG TTGGTCAAGA TAGAAAGATT GTTGACCCAG CTGATCAGGT GGCACAATAT ACCTATAATG TTTTACGACG TGATGGTTTA TTTGCGGCTG GTAATTCTGA TACAAAACAC GAGTACTATA CGACAGGTGA AGCTAAGAAG TTTACTGAAA TAACACGTCA ATGGATGAAT GATGAAACAA TTGTTGGTCA TCATGTAGAT GCTGAGGATT AA
|
Protein sequence | MEEKRDFNHH LFKGVFLMDN RPIGVLDSGL GGLTVLKKVI EKMPNESTIF IGDQANMPYG DRSKEEIISL TRDSVNFLLS KDVKIIIFGC NTATAVAMST IKKEIPLQII GVVQSGALAA ARTTETKNVA VIGTKATVNS HSYLKEIQYR DPKIQVSEFA QPKLAPLAEE DPAEEIKQAV VSESLAPLKK ADYDTLVLGC THYPLLRKEI VAVVGQDRKI VDPADQVAQY TYNVLRRDGL FAAGNSDTKH EYYTTGEAKK FTEITRQWMN DETIVGHHVD AED
|
| |