Gene LGAS_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0429 
Symbol 
ID4438867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp456578 
End bp457429 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content37% 
IMG OID639672287 
Productglutamate racemase 
Protein accessionYP_814272 
Protein GI116629100 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.13208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones104 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGAGA AAAGAGATTT TAATCATCAT TTGTTTAAAG GAGTTTTTTT AATGGATAAT 
CGACCAATTG GAGTTTTAGA TTCAGGCTTA GGTGGCTTAA CTGTTTTAAA AAAAGTAATT
GAGAAGATGC CTAACGAATC AACTATTTTT ATTGGTGACC AGGCTAATAT GCCCTATGGA
GATCGCTCAA AAGAAGAGAT TATTTCTTTA ACTCGCGACA GTGTAAACTT CTTATTAAGT
AAAGATGTAA AGATTATTAT TTTTGGTTGC AATACTGCCA CTGCGGTTGC AATGTCTACT
ATTAAAAAAG AAATTCCTTT GCAAATAATT GGAGTAGTTC AATCTGGTGC CTTAGCTGCA
GCTAGAACCA CAGAAACAAA GAATGTTGCG GTAATTGGTA CTAAGGCAAC TGTTAATAGT
CATTCTTATT TAAAAGAAAT TCAATATCGT GATCCAAAAA TTCAAGTAAG CGAATTTGCA
CAACCTAAAT TAGCGCCTCT TGCTGAGGAG GATCCTGCTG AAGAGATTAA GCAGGCTGTG
GTCAGCGAAA GCTTAGCGCC GTTGAAAAAG GCTGATTACG ATACCCTTGT TTTAGGATGC
ACCCATTATC CATTATTAAG AAAGGAAATT GTTGCAGTGG TTGGTCAAGA TAGAAAGATT
GTTGACCCAG CTGATCAGGT GGCACAATAT ACCTATAATG TTTTACGACG TGATGGTTTA
TTTGCGGCTG GTAATTCTGA TACAAAACAC GAGTACTATA CGACAGGTGA AGCTAAGAAG
TTTACTGAAA TAACACGTCA ATGGATGAAT GATGAAACAA TTGTTGGTCA TCATGTAGAT
GCTGAGGATT AA
 
Protein sequence
MEEKRDFNHH LFKGVFLMDN RPIGVLDSGL GGLTVLKKVI EKMPNESTIF IGDQANMPYG 
DRSKEEIISL TRDSVNFLLS KDVKIIIFGC NTATAVAMST IKKEIPLQII GVVQSGALAA
ARTTETKNVA VIGTKATVNS HSYLKEIQYR DPKIQVSEFA QPKLAPLAEE DPAEEIKQAV
VSESLAPLKK ADYDTLVLGC THYPLLRKEI VAVVGQDRKI VDPADQVAQY TYNVLRRDGL
FAAGNSDTKH EYYTTGEAKK FTEITRQWMN DETIVGHHVD AED