Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0403 |
Symbol | |
ID | 4438876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 421930 |
End bp | 422574 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639672261 |
Product | redox-sensing transcriptional repressor Rex |
Protein accession | YP_814246 |
Protein GI | 116629074 |
COG category | [R] General function prediction only |
COG ID | [COG2344] AT-rich DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.0351476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGAAA TTAAGATTCC TAAGGCTACT GCTAGACGCT TGCCACTGTA TTATCGCTAT TTGATCTTTT TAAATGATGA AGGAAAAGAA AAAGTTTCTT CAACTGAACT TGCTGAAGCA GTTCAAGTTG ACAGTGCTTC AATTCGTCGT GATTTTTCTT ACTTTGGTGC TTTAGGTAAG CGTGGCTATG GGTATGATGT TAAGAACTTG CTTAATTTCT TTAAAAAGAT TTTGAACCAA GATACTTTAA CTAATGTTGC CTTGGTCGGT GTTGGTAATA TGGGACATGC GCTTTTGAAT TATAACTTCA AGCGTACTAA TAATATCAGA ATTAGCGCCG CTTTTGACAT TAATCCTGAA ATTACTGGAA CAATTATGTC AGGTGTGCCA GTTTATGATA TGAGTGAAAT GAAGAAGCAG CTTCGTGAGC AACAAATTAC GATTGCAATC CTTTGTGTAC CGCAAACAGC AGCTCAAAAG ACTGCTAATG AAATGTTTGA TGCCGGGATT AAAGGAATTA TGAACTTTAC GCCACTTCGT TTATCTGCAC CTTCGAGTGT TCGTGTACAA AATGTCGACT TGGCGACTGA ACTTCAAACT TTGATTTATT TCTTAGATTC AGACAAAGAT AAGAACAAAA AATAA
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Protein sequence | MDEIKIPKAT ARRLPLYYRY LIFLNDEGKE KVSSTELAEA VQVDSASIRR DFSYFGALGK RGYGYDVKNL LNFFKKILNQ DTLTNVALVG VGNMGHALLN YNFKRTNNIR ISAAFDINPE ITGTIMSGVP VYDMSEMKKQ LREQQITIAI LCVPQTAAQK TANEMFDAGI KGIMNFTPLR LSAPSSVRVQ NVDLATELQT LIYFLDSDKD KNKK
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