| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0399 |
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| Symbol | |
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| ID | 4438872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 416518 |
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| End bp | 418116 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 639672257 |
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| Product | sucrose-6-phosphate hydrolase |
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| Protein accession | YP_814242 |
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| Protein GI | 116629070 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1621] Beta-fructosidases (levanase/invertase) |
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| TIGRFAM ID | [TIGR01322] sucrose-6-phosphate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000118801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0000128463 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTATCAAT ACCTCCCCCT CTTTTTAGAT ACAATTAGCT TTCTTTTTTA TCAAAATGAG
TGTGTAAAAA TGATTAATAG AAGAAAACAG TTTGAATACT TAGTTTCAAA TCTAAAAGAT
ATTCCTAAAG AAAATTTGAA CAAAGAAAAA AATAGTGTAA AAAGATCACC ATATCATCAA
AGAATTCATA TTGAGAGCTT ATTTGGCATG TTGGGTGATC CAAATGGTTT TTCATATTTT
AATGGATACT ATCATTTATT TCACCAATGG TTTCCGATGA AATATAGTAC GAATCCGAAT
TATTTTCAAC AGGGATGGTT TCATTGGAAA TCAAGAAATT TGGTTGATTG GATACCAGTT
GGCGAAGCAA TGAACAATGA TACTGTATTT GATAAGTATG GAGTATATTC GGGTAGTGCT
ATTCCTATCA ATAATAAATT GTTTCTTATG TACAATGGTA ATTCTTGGAC CAATACTGAT
ACAGATGATT GGCATAGAGT TCCGTCTCAA TTAGGAGCCT ATATGAATGA AAATGATAAT
GTAGCTAAAT TGGCGAATCC ATTAATTAAA GGACCAATTT CTGGTTATAC CGGTCATTTT
CGAGATCCTA AAATTTTTAA GAAAAATGGT AAATATTATT CAATAATCGG TGCACAAACA
AAAGCAAAAA CTGGTACTGT CCTAATTTAT GAAAGTCAAA ATTTAAAGCT TTGGAATAAA
GTTGGTGAAA TTAAAACTAA TTTTGAAAAA AATGGCTATA TGTGGGAGTG TTCAGATTAT
TTTGAATTAG ATAATAAAGG AGTGGTGCTT TTCTGTCCTC AAGGATTGAA GAGTAAAGGA
AATCAATTTT TAAATGCATT TCAAGCATGC TACGCCATTG GAAATAAGTT AGATTTTAGA
AACTTATATT TTGAAGGGAA AAAGTACGAA GAAATAGATT CTGGTTTTGA TTTTTACGCT
CCTCAAACAA TGATCGCGCC TGATGGAAGA CGTATTTTAA GCGCATGGAT GAGTATTATG
AATTCAAATT CTCCACTAAT TAAATATCAT TATGATGGAT GTTTAATTTT CCCGAGAGAA
TTATCAGTAC AAAATGATAA ACTCATTCAA AAACCAGTAA GCGAGATAAC AAAATTGTAT
ACGACTGATT ACAAGGGTAA GAGAACAATC AGTAAAAATC AGGAAATTAT CGCTGGTTTA
GTTAATTGTA GAGATATTAA GTTTGACATT TCTACTAAAT ATAATAATGC TATAAGTATA
ATAGACTTGT TTGCTGATAG GAAAAATACG AATCATTTGC GTTTAGTCTT AAATAGGATG
AAGAATAGAT TTATAGTGCA AAGAGGTAAA GCTGGGCTAG AATTTGAAGA CGAGTTTGGA
AATGAAAGAA GTTGTAAGCT GAAAGTTGAA AATTCTGTCA GCATACGAAT AATTCAAGAT
ATATCATCGG CAGAGATATT TATTAACAAT GGAGAAAATG TTTTTACAAT GCGAGTATTT
GTCCCTAAAG ATCAATATCA TATTTTTGTG AAAAATGTTA ATGGGGAAGT AAATGTTAAG
TATCAAATTC ATCAATTAAG AAAAATGAGC AGTGAATAA
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| Protein sequence | MYQYLPLFLD TISFLFYQNE CVKMINRRKQ FEYLVSNLKD IPKENLNKEK NSVKRSPYHQ
RIHIESLFGM LGDPNGFSYF NGYYHLFHQW FPMKYSTNPN YFQQGWFHWK SRNLVDWIPV
GEAMNNDTVF DKYGVYSGSA IPINNKLFLM YNGNSWTNTD TDDWHRVPSQ LGAYMNENDN
VAKLANPLIK GPISGYTGHF RDPKIFKKNG KYYSIIGAQT KAKTGTVLIY ESQNLKLWNK
VGEIKTNFEK NGYMWECSDY FELDNKGVVL FCPQGLKSKG NQFLNAFQAC YAIGNKLDFR
NLYFEGKKYE EIDSGFDFYA PQTMIAPDGR RILSAWMSIM NSNSPLIKYH YDGCLIFPRE
LSVQNDKLIQ KPVSEITKLY TTDYKGKRTI SKNQEIIAGL VNCRDIKFDI STKYNNAISI
IDLFADRKNT NHLRLVLNRM KNRFIVQRGK AGLEFEDEFG NERSCKLKVE NSVSIRIIQD
ISSAEIFINN GENVFTMRVF VPKDQYHIFV KNVNGEVNVK YQIHQLRKMS SE
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