| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0398 |
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| Symbol | |
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| ID | 4440329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 414527 |
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| End bp | 416491 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639672256 |
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| Product | sucrose PTS, EIIBCA |
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| Protein accession | YP_814241 |
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| Protein GI | 116629069 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG2190] Phosphotransferase system IIA components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00830] PTS system, glucose subfamily, IIA component
[TIGR01996] PTS system, sucrose-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000327344 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.00000162153 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTAGTA AAGAAAACAA AAAGATAGCT GAGGAGGTTA TAGCCGCCAT TGGCGGAAAA
GAAAATATCG TTTCTTTAGC CCACTGTGCT ACAAGATTAA GAATAGTTGT AAAAGATCGT
AAAAAGGTAA ATGAAAAAGC ACTAGATAAA ATTGATAAGG CAAAAGGATA CTTCTTTACG
GCTGGTCAAT ATCAGATTAT TTTTGGTACT GGCTTAGTAA ATGATGTTTA TGAAGCGGTA
AAAGAAGAAG GAGTTTCTAC AACATCTAAA GATGATCTGA ATGATGTAGC TGCAAAACAA
TCAGGATGGT TTCAAAGATC AATAAGAATG TTTGCAGATG TCTTTGTACC AATCATCCCT
GCTTTGGTTG CAACAGGTCT TTTTATGGGG TTGCAAGGTT TATTAACACA ACCAGCTCTT
TTAAAGATGA TGGGAATGTC AGCTAAATCA ATTCCGGTTC AATTTACTAC TTACTTTAAT
ATTTTAACTG GAACGGCTTT TAGCTTTTTA CCAGTTTTAA TTTGTTGGTC AGCATTTAGA
GTTTTTGGTG GTAGTCCAAT TTTGGGTATT TTACTTGGTT TAATGCTAGT TAATCCTGCT
TTACCATCAG CATGGGATGT TGCCCAAGGA AAAGTTGCTC CACTAATGTT TTTTGGCTTT
ATTCCAGTTG CTGGCTATCA AGCTTCAGTT TTACCAGCTT TTATTTTGGG ATTTATTGGA
GCGAAAACTG AAAAGTGGAT TCATAAACAT GTTATCAGTT CTCTTGATTT AATTGTTACT
CCATTTGCTA CATTATTAGT TGGAAGTATT TTAGGACTAC TTTGCGTTGG TCCAATCTTC
AGAATTGTTG AACAAGGAAT TTTACATGCA GCAGAATGGA TAGTTCAATT ACCATTTGGA
TTAGGTGGAC TAATTTGGGG TGCTGTTTGT CAGATGATTG TGGTTACTGG ATTACACCAT
GCACTAAACT TAGTAGAAAT CCAGTTATTA GCAAATACTC ACTGGAATCC TGTAAATCCA
ATTGGATCTG CTGCTATTGC CGCACAAGCT GGCGCTGCCT TGGCTGTAGC CTTACGAATT
CATTCAAATA AAATGAAACA AATTGCATAT CCATCAACAA TTTCAGCTTT ACTCGGTATC
ACTGAGCCAG CAATTTATGG TGTAAATATT AAATATATCA AACCATTCTT ATTTGGTTGT
ATTGGTGGTG GTATCGGTGG TTTTCTTTCA AGTATTTTAA ATTTGAAAGC TACTGGTATG
TCAATAACTG TTATCCCAGG TATATTATTA TTTTTGAATC AACAACTTCC ACTATATATT
CTTGTTTGTG TAGTTGGTTT TGGAGTGGCG TTTGGTTTAA CTTACGTTTA TTACGGTAAA
CATGCATTTG ATAGTAATAA AAATAGCAAG AAAGAAGATA TAGAGAAAAA ACAAAATACT
TTTAAGCAAG AGCCTAGTCA TGTATCAGAT GAAGTAATAG ATGCTCCTGT TAGTGGTAAA
ATTGAAGCTT TAAATTTAGT TTCTGATAAA GCCTTTGCTT CAGGAATGAT GGGAAAGGGA
ATAGCTATTG AACCATCATC AAATAATATA GTTTCTCCTG TTAATGGAAC GATTACTGTG
GCTTATCCAA CAGGTCATGC ATATGGAATT AAATCAGATG ATGGTGCAGA AATTCTCATT
CACCTAGGTA TAGATACAGT AAATCTAAAA GGAAAAGGCT TTAACACTGT AGTAAAGCAA
GGCCAAAAGA TAAATAAGGG TGAATTGCTT GGAACGTATG ATTATCAAGA AATAGGCAAG
GAGGGTTATG ACAATATAGT TATTGTTTTG ATTACTAATT CGAAGGATTA TGCAGAAGTT
GATCCAATTG CTTCTGGAAA TGTTCAAGCA CAACAAAAAT TAATTGCCTT AACTGAACCT
ACAATGTCTG AGCAAGCAAA AGGTACTGTA AATGAATTAA ATTAA
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| Protein sequence | MSSKENKKIA EEVIAAIGGK ENIVSLAHCA TRLRIVVKDR KKVNEKALDK IDKAKGYFFT
AGQYQIIFGT GLVNDVYEAV KEEGVSTTSK DDLNDVAAKQ SGWFQRSIRM FADVFVPIIP
ALVATGLFMG LQGLLTQPAL LKMMGMSAKS IPVQFTTYFN ILTGTAFSFL PVLICWSAFR
VFGGSPILGI LLGLMLVNPA LPSAWDVAQG KVAPLMFFGF IPVAGYQASV LPAFILGFIG
AKTEKWIHKH VISSLDLIVT PFATLLVGSI LGLLCVGPIF RIVEQGILHA AEWIVQLPFG
LGGLIWGAVC QMIVVTGLHH ALNLVEIQLL ANTHWNPVNP IGSAAIAAQA GAALAVALRI
HSNKMKQIAY PSTISALLGI TEPAIYGVNI KYIKPFLFGC IGGGIGGFLS SILNLKATGM
SITVIPGILL FLNQQLPLYI LVCVVGFGVA FGLTYVYYGK HAFDSNKNSK KEDIEKKQNT
FKQEPSHVSD EVIDAPVSGK IEALNLVSDK AFASGMMGKG IAIEPSSNNI VSPVNGTITV
AYPTGHAYGI KSDDGAEILI HLGIDTVNLK GKGFNTVVKQ GQKINKGELL GTYDYQEIGK
EGYDNIVIVL ITNSKDYAEV DPIASGNVQA QQKLIALTEP TMSEQAKGTV NELN
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