Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0378 |
Symbol | |
ID | 4440309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 394372 |
End bp | 394914 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639672236 |
Product | hypothetical protein |
Protein accession | YP_814221 |
Protein GI | 116629049 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.337396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.000000691102 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGCTTTTTT GGAAGGTAGG GATGCCAATG AAGACAGGGA TAAAGAAAAT AGATTTACAA GGTTTAGTTA CTTTAGCTCT ATTTGTAGCG ATGGATATTG TATTAGAAAA AATTTCTTTT GGTCCTTCAA CTATAAAAGT AGGATTGGGA TTTATTGGAA GTGCGCTTTT AGGCTATTAT TTTGGCCCAC TATGGGGCGG AATTGGTGCA TTGATTAGTG ATTTATTGCG GTCAGCTATT TTTGGAGTTG AGGGAGGATT TTTCCCAGGC TTTACCCTGT CTGCTATCGT CGGCGTGGTA ATCTATGCCT TATTTTTATA CCAAAAGCCA ATTAAATGGT GGCGCGTAGT TGCTGCAACG TTATTAGTTA CTTTGATAGT TAATGTATTA ATGAATACTT ACTGGATTCA TTTATTGTAT GGTTTGGATC TACGAGCAGC TTTCTTACAA AGAATCTTGA AAGAGTTAAT TACGCCATGG ATTCAGATTG TTGTACTTTA TGTGATTTTA AATGCTTTTC AACGTGTTAA AATAAGAAGG TAA
|
Protein sequence | MLFWKVGMPM KTGIKKIDLQ GLVTLALFVA MDIVLEKISF GPSTIKVGLG FIGSALLGYY FGPLWGGIGA LISDLLRSAI FGVEGGFFPG FTLSAIVGVV IYALFLYQKP IKWWRVVAAT LLVTLIVNVL MNTYWIHLLY GLDLRAAFLQ RILKELITPW IQIVVLYVIL NAFQRVKIRR
|
| |