Gene LGAS_0377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0377 
Symbol 
ID4440308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp393614 
End bp394348 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content33% 
IMG OID639672235 
ProductAcyl-ACP thioesterase 
Protein accessionYP_814220 
Protein GI116629048 
COG category[I] Lipid transport and metabolism 
COG ID[COG3884] Acyl-ACP thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00000890944 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000000869045 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAAGA TTTTTAAAGA AGAACATCAA GTTACTTACG GCGATTGTGA TGAAACAGGA 
AAAATTCAGC TTCCAAAATT AATTGAACAT TTTATGAAAG TTTCAAATGA TCAATTAACT
CAAGGAGGCG CTGGGATTTA TGATTTATTA AAACAAAATT TAGGCTGGGT GGTAGTTGAA
TATCATCTTG ATCTGAAGCG TCTACCTGAA GCTGGTGAAG AAATTACTGT TACTACAAAT
GGTAGTGGCT ATAATCGCTT TTTTGAATAC AGCGATTTTG GTATAATAGA TTCTACTAAC
AAAAAGATAG TAGATGCCAA AAGCCAGTGG GTAATTTTAG ATCTGAAAAA TCGAAAAATT
ACTGAAGCAG ATAGTCAAAT GATGGAAAAA TTTGGTAATC CATACTTGAA GCATATGCCA
CGTTTTAAGA GATTACGTCC TTTGAAGGAA TATGACTCAA GTCAGACCTA TGCAGTTCGG
TACTATGATT TAGATACAAA CCATCATTTA ACTAATAGTG TTTATTTTGA TTGGATGATT
GATACTTTAC CGAGAGAATT TTTGAATTCT CATACTGTCA AAAGTGTCGA TATTTCATTT
AAAAAAGAAG TCCAGTATGG CGATCAAGCC TTGTCTGAAC TTACGCTTGA TCAAAATACG
CTTATTTCAT ATCATTTGAT TTCTAATCAG GGTGAAGTTT CTGCTTTGGC TGAAATTAGT
TGGAGAGAAA ATTAA
 
Protein sequence
MEKIFKEEHQ VTYGDCDETG KIQLPKLIEH FMKVSNDQLT QGGAGIYDLL KQNLGWVVVE 
YHLDLKRLPE AGEEITVTTN GSGYNRFFEY SDFGIIDSTN KKIVDAKSQW VILDLKNRKI
TEADSQMMEK FGNPYLKHMP RFKRLRPLKE YDSSQTYAVR YYDLDTNHHL TNSVYFDWMI
DTLPREFLNS HTVKSVDISF KKEVQYGDQA LSELTLDQNT LISYHLISNQ GEVSALAEIS
WREN