| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0372 |
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| Symbol | tmk |
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| ID | 4440303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 390530 |
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| End bp | 391183 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639672230 |
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| Product | thymidylate kinase |
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| Protein accession | YP_814215 |
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| Protein GI | 116629043 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0000036403 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGGGGGTAG ACATGAGAGG ATATTTAATT ACATTTGAAG GCCCAGATGG GGCAGGTAAA
ACCACAGTTA TCAACGAGCT TATCAAGCAG TTGCCAAAAG AAATACAAGA AAAGACGATT
ATTACACGTG AGCCTGGTGG ATCAAAAATT TCTGAAAATA TTAGAACAAT TATTTTAGAC
CCAGCAAACA AGGAAATGGA TGATCGAACT GAAGCTCTTC TTTATGCAGC TCAAAGAAGT
CAACATGTTA GTGAAGTTAT CCGTCCGGCT TTGGAAGCTG GAAAAATTGT TTTATCAGAT
CGATTCATTG ACAGTTCTTT AGCCTACCAA GGCGTTGGGC GTAATTTGGG TGTTGAAGCT
GTAAAACAAA TTAATGATTT CGGAACTGGC GGTCTTGAAC CTGATTTGAC GATCTTTTTA
GACTTAGATC CCGCAACTGG TTTGGCTAGA ATTGAAAAGG AACGGGCCGG ACAAGAAGAT
CGGCTTGAGC AGGAAAAATT AGCTTTCCAC CAAAAGGTTT ATGCCGGATA TACAGACTTG
TTAAAACGAT ATCCTGATAG AATTAAAAAG GTGGATGCTA ATTTGCCAAT CAAGGAAGTT
GCGGCTAATA GTGTTAAAAT AATAAGAAAG CAATTACCTG ATATTTTTAT GTAA
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| Protein sequence | MGVDMRGYLI TFEGPDGAGK TTVINELIKQ LPKEIQEKTI ITREPGGSKI SENIRTIILD
PANKEMDDRT EALLYAAQRS QHVSEVIRPA LEAGKIVLSD RFIDSSLAYQ GVGRNLGVEA
VKQINDFGTG GLEPDLTIFL DLDPATGLAR IEKERAGQED RLEQEKLAFH QKVYAGYTDL
LKRYPDRIKK VDANLPIKEV AANSVKIIRK QLPDIFM
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