| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0368 |
|---|
| Symbol | |
|---|
| ID | 4440299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 387449 |
|---|
| End bp | 389257 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639672226 |
|---|
| Product | DNA polymerase III, gamma/tau subunit |
|---|
| Protein accession | YP_814211 |
|---|
| Protein GI | 116629039 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.614636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.000122178 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTATC AAGCGCTATA TCGTAAATGG CGTCCTAGAA CTTTCGATGG GGTTGTAGGT
CAAACAGCGA TTACTGATAC ATTAAAAAAT GCAATCAAGC GTGGCAAGAT ATCACATGCT
TTTTTGTTTG CGGGACCACG TGGTACTGGT AAAACATCAT GTGCGAAAAT TTTTGCCAAG
GCCTTAAATT GTACTAATTT GCAAGATGGT GAGCCATGTA ACGAGTGTGA GAACTGTCTT
GCGGCAGATA AAGGGACGAT GAATGATATT ATCGAAATCG ATGCAGCATC AAACAACGGT
GTTGATGAGA TTCGTGATAT CCGCGATAAG GTAAAATATG CCCCCACCCA GGGAAAATAT
AAAGTTTATA TTATCGACGA GGTTCATATG CTTTCAATGG GTGCCTTTAA TGCCTTGCTT
AAGACACTAG AGGAGCCACC TGAGCATGTG GTATTTATTT TAGCTACAAC TGAATTACAA
AAAGTCCCAG CAACTATTAT TTCAAGAACG CAACGCTATA ATTTTAAGCG GATTGATCAG
CATGATTTGA TTGCTCGCAT GACTTACATT CTTGGTCAAG AAAAGATCGA CTTTGAAGAA
AAGGCACTTG AAGTAATTGC TCAAGTAGCT GATGGTGGAA TGCGGGACAG TTTAAGTATC
TTGGATCAAA TTTTATCCTA TGATCAGGAT AAGGTTAAGT ATGACGATGC CTTAAAAATT
ACTGGTTATG CTGCTCAAGA AAAGATTGAG CAAGTCTTAC TAGACTTACT TAAGGGCCAA
ACGTCAGAAG CATTCGAGAT AGTTCATAAT TTACTTCAAG ACGGTGCATC AACTAAGAAT
ATTTTAGATG AACTAATTAG CTTGACTGTA AAAGGGATGC TGGTTGTTAA GAGCAATAAA
GAAGCAACTT TTTTAACTAA AGATTATGTA ACTGAATTAG CTAAAATTCC AGAAGAAAAG
TTTTATAATT TAGTTCAAGC AGCCAATACT GCTTTAAATG ATTTGCGCTA CACTAATCAG
CAACAAATTC CACTTGATGT GTTTGTGGTT CAAGTTACGC AAGCAGCAGG TGAAAAAGCA
CCAGTAGAAC AAGGCGATGC AGTTTCTTCA GCTGTTGTTC AAAAATTAAA AAGTGAAATA
GATAGTTTGA GTAAACAAGT TGCTGAATTG AAAAATAGAC CTGTTCAAGC AACTCGCAGA
ATTAGCTCTG ACTTTTCTGG AACCATTAAG ACAGAAACTA ATTCTCATCC TAAAAAAGTT
GTTGATCAAG CAGCTGATAC TGAGCAAAAG CCTAAGAGAA GAAAAGCTAG CGCTAATAAC
CAGGCAGCGC AAGAAAATAA TCGTCGTCAA GTCTATCATG TACTTGAAAA TGCAACTAAA
GAAGATTTAA ATACAGTCAA AGATATTTGG CCAGACTTAT TGTCTACTTT GAAGGTATCT
CAAAGAGCCG TCATGGAAGT TTTGAATCCT GTAGCTGCAA GTCATGAGCA AATTGTTTTA
AAATGTAAAT ATGAATTATG GTTTGAACGA GCAAATCAAG ATGGGGATCT AATTTCTCAA
CTTGAAACTG AGATTGCCAA ATTAACAAAG CATAATTATA GTATTGTTTT AGTTGCAGAT
TCTTCATGGT TAAAAGTACG GCATGATTTT GTGGCAAGTC ATAAGGAAGA ATTACTTGCT
AAGAAATTTC AAAAAATAGA AAAATCTGAA CAAGAAGCAA ATGAAAACCA GGTAGATCCT
CAAGCTAAAA AGGAAGTCAT TGATAAGGCA AAAGAACTTT TTGGCGATCT AGCACAGATT
AAAGATTAA
|
|---|
| Protein sequence | MAYQALYRKW RPRTFDGVVG QTAITDTLKN AIKRGKISHA FLFAGPRGTG KTSCAKIFAK
ALNCTNLQDG EPCNECENCL AADKGTMNDI IEIDAASNNG VDEIRDIRDK VKYAPTQGKY
KVYIIDEVHM LSMGAFNALL KTLEEPPEHV VFILATTELQ KVPATIISRT QRYNFKRIDQ
HDLIARMTYI LGQEKIDFEE KALEVIAQVA DGGMRDSLSI LDQILSYDQD KVKYDDALKI
TGYAAQEKIE QVLLDLLKGQ TSEAFEIVHN LLQDGASTKN ILDELISLTV KGMLVVKSNK
EATFLTKDYV TELAKIPEEK FYNLVQAANT ALNDLRYTNQ QQIPLDVFVV QVTQAAGEKA
PVEQGDAVSS AVVQKLKSEI DSLSKQVAEL KNRPVQATRR ISSDFSGTIK TETNSHPKKV
VDQAADTEQK PKRRKASANN QAAQENNRRQ VYHVLENATK EDLNTVKDIW PDLLSTLKVS
QRAVMEVLNP VAASHEQIVL KCKYELWFER ANQDGDLISQ LETEIAKLTK HNYSIVLVAD
SSWLKVRHDF VASHKEELLA KKFQKIEKSE QEANENQVDP QAKKEVIDKA KELFGDLAQI
KD
|
|---|
| |