| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0360 |
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| Symbol | |
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| ID | 4440291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 382581 |
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| End bp | 383372 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639672218 |
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| Product | amino acid ABC transporter periplasmic protein |
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| Protein accession | YP_814203 |
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| Protein GI | 116629031 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000000870142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.00010092 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGAAAA AAATAATAAA ACTTCTCGGC CTACTGATTA TTGTAATTAC TTCTGTTGGA
TTGGCAGGCT GCCAAAGACA AGCAAGCTCT TGGCAGAAAA TTAAAGAGCG TGGAACTCTA
GTAATTGGTG TGGATGATAG TTTTGTACCA ATGGATTTTC GTCAAAAAAA TGGTAAGCTA
GTGGGCTTTG ATGTTGACTT AGCAACAGCC GTCTGCAAGG AAATTGGTTT AAAACCTGAT
TTTCAAACTA TCGACTGGTC GATGAAAGAA ACCGAATTAC GTAATGGAAC AATTGATGTC
ATTTGGAATG GGTATACTAA AACTAAAGCT CGAGCAAAAA AAGTAGCTTT TTCACGACCT
TACCTTGAAA ACGATCAAAT TTTAGTAACG CGTAAAAAAG AACAGATCAA TAATTATTGC
CAAATGAAAG GTAGGATTCT CGGAGTACAA ACAGGATCGT CTGGTGCCGA TGACTTGGAT
AATTATCCTA ATGTTCTAAA AAAGCGGGTT AAAAGCACGG TTTTATATGA TACTTATAAC
AATGCCTTCA TCGATTTAAA AGCTGGCAGA ATCGACGGTT TATTGATCGA TGGGGTATAT
GCAAACTATT ACTTAGCTCA TAGCAAGTAC CAAAAAGAAT TTAAAAAAGA AAAACTACCA
TATCCAAGCG AAAAATTTTC AGTAGGAATC AATAAGAAAG ATCAAATTTT GAAAGATAAG
ATTAATCAAG CGCTTGATCA TTTAGAAAAG ACTGGCGAGT TAGAAAAGAT AAAACAAAAA
TGGTTTAATT AA
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| Protein sequence | MMKKIIKLLG LLIIVITSVG LAGCQRQASS WQKIKERGTL VIGVDDSFVP MDFRQKNGKL
VGFDVDLATA VCKEIGLKPD FQTIDWSMKE TELRNGTIDV IWNGYTKTKA RAKKVAFSRP
YLENDQILVT RKKEQINNYC QMKGRILGVQ TGSSGADDLD NYPNVLKKRV KSTVLYDTYN
NAFIDLKAGR IDGLLIDGVY ANYYLAHSKY QKEFKKEKLP YPSEKFSVGI NKKDQILKDK
INQALDHLEK TGELEKIKQK WFN
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