| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0357 |
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| Symbol | rplA |
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| ID | 4440288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 380483 |
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| End bp | 381175 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639672215 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_814200 |
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| Protein GI | 116629028 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.000538139 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAAAGC ATGGAAAGAG ATATTTAGAA GCAGCTAAAA AAGTTGATTC AACTAAATTT
TATTCAGTAG ATGAAGCTAT GAAGTTAGCA AAAGAAACTT CATACGCAAA CTTTGACGCA
ACTATCGAAG TTGCATATAA CTTAAGCGTT GACCCAAAGC AAGCAGATCA ACAAATTAGA
GGTGCATTGG TACTTCCAAA CGGTACTGGT AAATCTAAGA AGGTTGTTGT TTTTGCTGAA
GGTCCACAAG CTGACCAAGC TAAAGAAGCA GGTGCTGACG AAGTTGGTTC TGACGATTTA
GTAGAAAAAG TTCAAAACGG TTACTTAGAC TTTGACGTAG TTATTGCTAC TCCAATGATG
ATGGCTAAAG TTGGTCGTTT AGGTCGTATC TTAGGACCTA AGGGCTTAAT GCCAAACCCT
AAGACTGGTA CTGTTACTAT GGACGTTGCT AAAGCTGTTG AAAACCAAAA AGCAGGTCAA
GTTGAATACC GTGTTGATAA GCAAGGTTTA ATTCACGCAC CAATCGGTAA GGCTTCATTT
GACGCTGATA AGTTAGCACA AAACTTTGAT GCATTACGTG ATGTTATTCT TCGTGCACGT
CCTGCATCAG CTAAGGGTCA ATACATTAAG AGTGTTGCCG TTTCTGCAAC CTTTGGCCCT
GGTATCCACT TGGATCCATT GAACTTAGAC TAA
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| Protein sequence | MAKHGKRYLE AAKKVDSTKF YSVDEAMKLA KETSYANFDA TIEVAYNLSV DPKQADQQIR
GALVLPNGTG KSKKVVVFAE GPQADQAKEA GADEVGSDDL VEKVQNGYLD FDVVIATPMM
MAKVGRLGRI LGPKGLMPNP KTGTVTMDVA KAVENQKAGQ VEYRVDKQGL IHAPIGKASF
DADKLAQNFD ALRDVILRAR PASAKGQYIK SVAVSATFGP GIHLDPLNLD
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