Gene LGAS_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0306 
SymbolrplR 
ID4438816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp340496 
End bp340855 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content39% 
IMG OID639672165 
Product50S ribosomal protein L18 
Protein accessionYP_814150 
Protein GI116628978 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.38344e-28 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGATTTCTA AACCAGATAA AAACAAATTA CGCTTAAAGC GTCATAAACG TATTCGTGGA 
AAGATTTCTG GTACTGCTGA GCGCCCACGC TTAAGTGTTT TCCGTTCAAA CAAAAACATC
TACGCTCAAT TAATTGATGA TGTAGAGGGT GTAACGCTTG CAAGTGCCTC AACAAATGAT
AAAAATATTT CAGCTGAAGG TTCTAAGATG GAACAAGCTG CTGAAGTAGG TAAAGCTTTA
GCTGAAACTG CTGCTAAGAA GAACATTAAG AGTGTTGTAT TTGATAGAAG TGGTTACTTA
TACCACGGTC GTGTACAAGC TCTTGCTGAT GCAGCACGTG AAAACGGATT AGAATTCTAG
 
Protein sequence
MISKPDKNKL RLKRHKRIRG KISGTAERPR LSVFRSNKNI YAQLIDDVEG VTLASASTND 
KNISAEGSKM EQAAEVGKAL AETAAKKNIK SVVFDRSGYL YHGRVQALAD AARENGLEF