| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0298 |
|---|
| Symbol | rplP |
|---|
| ID | 4438808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 337157 |
|---|
| End bp | 337594 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639672157 |
|---|
| Product | 50S ribosomal protein L16 |
|---|
| Protein accession | YP_814142 |
|---|
| Protein GI | 116628970 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0197] Ribosomal protein L16/L10E |
|---|
| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 1.11723e-28 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | GTGTTAGTAC CTAAGCGTGT AAAGCACCGT CGTGAATTCC GCGGTAAAAT GCGTGGTGAA
GCTAAAGGCG GAAAGACCAT TGCATTTGGT GAATATGGTT TAGAAGCTGT TGAATCTCAC
TGGATTACTA ATAGACAAAT TGAAGCCGCT CGTATTGCTA TGACTCGTTT CATGAAGCGT
GGCGGACGTG TTTGGATTAG AATCTTCCCA CAAAAATCCT ACACTGCAAA AGGTGTTGGT
GTTCGTATGG GTTCCGGTAA AGGTGCACCA GCTGGTTGGG TAGCTGTTGT TAAAAGAGGC
AAGATTATGT TTGAAATCGG TGGCGTTTCA GAAGACGTTG CCCGTGAAGC TTTAAGACTT
GCTTCAAACA AGCTTCCAAT TAAGACTAAG TTTGTTAAGA AGAGTTCGGA AGTAGGTGGC
GAATCTAATG AAGGCTAA
|
|---|
| Protein sequence | MLVPKRVKHR REFRGKMRGE AKGGKTIAFG EYGLEAVESH WITNRQIEAA RIAMTRFMKR
GGRVWIRIFP QKSYTAKGVG VRMGSGKGAP AGWVAVVKRG KIMFEIGGVS EDVAREALRL
ASNKLPIKTK FVKKSSEVGG ESNEG
|
|---|
| |