| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0291 |
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| Symbol | rplC |
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| ID | 4438731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 333375 |
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| End bp | 334004 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639672150 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_814135 |
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| Protein GI | 116628963 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000000100637 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 1.4129e-28 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGACCAAAG GAATCTTAGG AAGAAAGGTC GGTATGACTC AAATCTTCAC TAAAAACGGT
ATCTTGGTTC CTGTAACTGT TATTGAAGCA ACCCCTAACG TTGTTTTACA AGTTAAAACT
AACGAATCAG ACGGTTACGA AGCAGTTCAA GTAGGTTACC AAGACATGCG TGAAGTATTG
AGTAACAAAC CAGCCAAAGG TCATGCTGCA AAAGCAAAGA CTTCACCTAA GCGCTTCATT
CGGGAAATCC GCGATGTCGA GCTTAAGGAT TACGAAGTCG GCTCAGAAAT CACGGTGGAC
TCATTTAGTG AAGGTGACGT AGTTGACGTT ACTGGCACTA CAAGAGGTCA TGGTACTCAA
GGTAACATCA AGCGTTGGGG CCAATCAAGA GGTCCAGAAA CTCACGGTTC TAGATACCAC
AGAATCCCAG GTTCAATGGG TTCTATCATT AACCGTGTAC CTAAGGGTAA GAAGTTACCT
GGTCACATGG GTGGCAAGAA AGTTACCGTA CAAAACTTAG TAATTGAAAA AGTTGTACCT
GAAAAGAACG TACTTTTAGT CAAAGGTAAT GTTCCTGGTG CAAAGAACTC ATTAATTTTT
GTAAAATCTG CTGCTAAAGC TGCTAAATAG
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| Protein sequence | MTKGILGRKV GMTQIFTKNG ILVPVTVIEA TPNVVLQVKT NESDGYEAVQ VGYQDMREVL
SNKPAKGHAA KAKTSPKRFI REIRDVELKD YEVGSEITVD SFSEGDVVDV TGTTRGHGTQ
GNIKRWGQSR GPETHGSRYH RIPGSMGSII NRVPKGKKLP GHMGGKKVTV QNLVIEKVVP
EKNVLLVKGN VPGAKNSLIF VKSAAKAAK
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