Gene LGAS_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0288 
Symbol 
ID4438728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp330172 
End bp330642 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content38% 
IMG OID639672147 
Product30S ribosomal protein S7 
Protein accessionYP_814132 
Protein GI116628960 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000131249 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value3.87483e-16 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTAGAA AAGGTAATGT TGCTAAGAGA GATGTTTTAG CAGATCCAGT TTATAACTCT 
AAATTGGTTA CTAAATTAAT TAACCACTTA ATGATTGATG GTAAGAAGGC AAAGGCATCT
TCAATTCTTT ACGATGCTTT TGGTATTATT CAAGATAAGA CTGGTAAAGA ACCAGTTGAA
GTTTTTGAAG AAGCAATGAA CAATGTTATG CCAGTTTTGG AAGTTAAAGC TCGCCGTATC
GGTGGTTCTA ACTACCAAAT CCCAGTTGAA GTTCGCCCAG AAAGAAGAAC TACTCTTGGC
TTAAGATGGC TTGTTTCTTA CGCTCGTTTA CGTAATGAAC ATACTATGGA TGAACGTCTT
GCAAACGAAA TTATGGATGC TGCTAACAAT ACTGGTTCAG CAGTTAAGAA ACGTGAAGAC
GTCCACAGAA TGGCAGAAGC AAACCGTGCA TTTGCTCACT ACCGCTTCTA A
 
Protein sequence
MPRKGNVAKR DVLADPVYNS KLVTKLINHL MIDGKKAKAS SILYDAFGII QDKTGKEPVE 
VFEEAMNNVM PVLEVKARRI GGSNYQIPVE VRPERRTTLG LRWLVSYARL RNEHTMDERL
ANEIMDAANN TGSAVKKRED VHRMAEANRA FAHYRF