| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0287 |
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| Symbol | rpsL |
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| ID | 4438727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 329739 |
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| End bp | 330146 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639672146 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_814131 |
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| Protein GI | 116628959 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 8.37447e-16 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000000000000939126 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCAACAA TTAACCAATT GGTTAGAAAA GGCCGTCACT CAAAGACGAC TAAATCTGAT
TCACCAGCTT TAAACTATGC TTACAACAGC ATGAAGAAAA AGATGAACTA CAACCCAGCA
CCTCAAATGC GTGGTGTTGC AACTCGTGTA GGTACTATGA CACCTAAGAA GCCTAACTCA
GCTTTACGTA AGTACGCTCG TGTTCGTCTT TCAAACTTAA TCGAAGTTAC TGCTTACATT
CCTGGTATTG GTCATAACTT GCAAGAACAC TCCGTTGTTT TAATTCGTGG TGGTCGTGTA
AAGGACCTTC CTGGTGTTCG TTACCACATC ATTCGTGGTG CTTTGGATAC TGCAGGTGTT
GATGGTAGAA AACAAGGCCG TTCTAAGTAC GGTGCTAAGA AAGGTTAA
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| Protein sequence | MPTINQLVRK GRHSKTTKSD SPALNYAYNS MKKKMNYNPA PQMRGVATRV GTMTPKKPNS
ALRKYARVRL SNLIEVTAYI PGIGHNLQEH SVVLIRGGRV KDLPGVRYHI IRGALDTAGV
DGRKQGRSKY GAKKG
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