| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0248 |
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| Symbol | |
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| ID | 4438791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 279463 |
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| End bp | 281199 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639672108 |
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| Product | putative oxalyl-CoA decarboxylase |
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| Protein accession | YP_814095 |
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| Protein GI | 116628923 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR03254] oxalyl-CoA decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 83 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.0169011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGATG ACTCTTTAAA TAGAACTGGT GCCAGTTTAT TAATTGACGC TTTGCAAAAA
AATGGTATTA ACAACCTATA CGGAGTTGTA GGTATTCCGA TTACTGATTT GGCTAGATTA
GCTGAATTAA GAGGAATGAA GTATTATGGC TTTCGTCGTG AAGACTCAGC CGTAGACGCT
GCTGCAGCTG CCGGATTTTT AACTAAAAAA CCTGGTGTAG CAATGACTGT ATCCGCACCA
GGTTTTTTGA ATGGATTAAC TGCTTTAGCA CAAGCTACTA AGAACTGTTT CCCATTAATT
ATGATTTCTG GTTCTTCAGA ACGTCATATT ATCGACTTAG CTCAAGGTGA CTACGAAGGT
TTAGATCAAT ACAACGTTGC TAAGCCTTTC TGTAAAAAAG CTTACCGTGT TGATAGAGCA
CAAGATGTTG GTTTAGCAGT CGCACGCGCT ATTCGTACTG CTGTATCTGG TAGACCAGGT
GGTGTTTACC TTGATTTACC AGCTGACACT ATTGCCCAAC TCAATGATGA CCTTGGCGAA
AAGAACATGG GCGTCTACAA GTTAGTTGAC CCAGCTCCAC TTCAAGAACC AAGTGACGAT
GCAATCAACC GCGCAGTTGA CATCATTAAG CAAGCTAAAA AACCTTTGAT CATTCTTGGT
AAAGGTGCTG CTTATGACAG AACTGAAAAG CAAGTTCAAG AATTGATTAA CAAGACTGAT
ATTCCATTCT TACCAATGTC AATGGCTAAA GGTCTTGTCC CAGATGACGA CAAACACTCT
GCCGCTGCTG CCCGCTCATT ATCATTAAAG AATGCAGATG TAGTAATTTT AATTGGTGCA
AGATTAAACT GGATGCTTTC ATATGGTGAT GCACCACAAT TTAACCCAGA GGCTAAATTT
ATCCAATTAG ACATCGACGC AACTCAATTT GATTCTGCTC AAAAGATTTC TGCACCACTT
CAAGGTGACT TAACCTCTAT TTTAAACAAA TTAGTTCCAG CTCTTACTGC AACTGGCTAC
AAGGTACCTT CTGACTGGCT TGATGCAATT GCTCAAGATA CTGCTAAGAA TGACGCTAAG
TTCGCTAAAA GAATTAAGGC TGGTGAAACT AACCCAGAAT TTGGATATTA CGGCGCTATC
GAACCTATTA ATGATTACTT CCAAGAACAT CCAGACACCT ACCTTGTAAG TGAAGGTGCT
AATACGCTTG ATATTGGTCG TGACATGATT GGTATGAAAC TTCCTCGCCA CAGACTTGAT
ACTGGTACTT GGGGCGTCAT GGGCGTTGGC ATGGGTTATG CCATTGCTAC TGCTGTTGAA
ACTGGTAAGC ATGTCGTTGC CTTAGATGGG GACAGTGCAT TTGGCTTTGA CGGTATGGAT
GTTGAAACAA TGTGCCGTTA CAATTTACCT ATTACTGTTG TCGTTATTAA CAATGGTGGT
ATTTACAATG GTGTTGACAA TGTTGTTCCA GATCAATTAG GTCCAACTAC GCTTGATCCA
ACTGGTCGCT ATGACCTAAT CGCTAAGGCC TTCGGTGGTG ACAATTACTA CGTAACTAAC
TATCAAGAAA TGAAAGATAC TTTTGCTACA GCCGTTGAAT CAGGTCGTCC AAGTATTATC
AACGTTCAAA TTGATCCTTC AATGGGTAAA GAATCAGGCC ACATCGGTAA TTTAAACCCA
GAATTAAACT TAAAGCCTCT TGAAGAAGCT GAACAAAAGA AAATTGATAA GGAGTAA
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| Protein sequence | MVDDSLNRTG ASLLIDALQK NGINNLYGVV GIPITDLARL AELRGMKYYG FRREDSAVDA
AAAAGFLTKK PGVAMTVSAP GFLNGLTALA QATKNCFPLI MISGSSERHI IDLAQGDYEG
LDQYNVAKPF CKKAYRVDRA QDVGLAVARA IRTAVSGRPG GVYLDLPADT IAQLNDDLGE
KNMGVYKLVD PAPLQEPSDD AINRAVDIIK QAKKPLIILG KGAAYDRTEK QVQELINKTD
IPFLPMSMAK GLVPDDDKHS AAAARSLSLK NADVVILIGA RLNWMLSYGD APQFNPEAKF
IQLDIDATQF DSAQKISAPL QGDLTSILNK LVPALTATGY KVPSDWLDAI AQDTAKNDAK
FAKRIKAGET NPEFGYYGAI EPINDYFQEH PDTYLVSEGA NTLDIGRDMI GMKLPRHRLD
TGTWGVMGVG MGYAIATAVE TGKHVVALDG DSAFGFDGMD VETMCRYNLP ITVVVINNGG
IYNGVDNVVP DQLGPTTLDP TGRYDLIAKA FGGDNYYVTN YQEMKDTFAT AVESGRPSII
NVQIDPSMGK ESGHIGNLNP ELNLKPLEEA EQKKIDKE
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