Gene LGAS_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0219 
Symbol 
ID4438745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp253114 
End bp254385 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content39% 
IMG OID639672079 
ProductABC-type sugar transport system, periplasmic component 
Protein accessionYP_814066 
Protein GI116628894 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2182] Maltose-binding periplasmic proteins/domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000685496 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.000000202467 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGTTCACG GTTGTAATAA TGTGTTTAGC CTTTTATGGC TAGGAGGAAA TATCATGAAG 
TTATGGAAAA AATTGGCTTT AGGTAGTGTC GTAGCTTTAT CAGCTATTTC ATTAACTGCC
TGTGGTAAGA GTTCTAATTC AAACGAATCA AAGAGCTCAG ATAAACAACT AACCCTTTGG
GTAGATACAG CTCGTGTTAG TTGGTACAAG GGTGTTGTAA AAGACTTTGA AAAAGAACAC
CCTAACATTA AAGTTAAGGT TACCCAAAAC CCTAATGGTT CTGCTAATGC TAAGACTGAC
GTTGGTAAGG ACCCTTCAAA GGCCGCAGAT GTTTTTGGTG TTCCAAACGA CCAATTAGGT
CAAATGGCAG ATTCAGGTTA TATTAACCCA CTTTCACCAT CTGATACTAA GGAAATTAAG
AAGAACTCAG TTCCAGAAGC ATATAAGGGT GCTGAATGGA AAGGTAAGCT TTACGCATAT
CCATATGCAG AACAAGCTCA AACCGTTTAC TACGACAAGT CTAAGCTTTC TCCAGAAGAT
GTTAAATCTT GGAAGACCAT GACTTCTAAA GGTGTAGTTG CAACCGACTT TACTAATGCT
TACGTAATGT GGCCAGTAAT GTTCTCAGCA GGCACTAAGC TATTTGGTGA TAGCGGAGAA
GAAGTAAAAG GTTCCACATT TGACTCACAA AATGGTGTCA ACGCAATGAA ATGGTATGCA
GAACAAAAGA ACAACAAGGG TGTTATGCAA ACCTCTAACG CACTTAACCA ATTAAAGAAG
GGTCACGCTC AAGCTATCTT AGATGGTCCA TGGAATGCAG CAAACATTAA GAAGATCTTA
GGTAAGAACT TAGGTGTTGC TCCATATCCA ACTATTGAAC TTGGTGGCAA GACTGCTCAA
ATGGAAGCTT TCTTAGGTAT TGAATGTTTC GCAGTTAACT CTCATACTTC TAACGCTAAG
AATGCTGCAA TTTTGGCTAA ATACTTATCA AACAAGGAAA ACCAATTAAT TGTTCACAAG
AATGCTGGTG AAATTCCTGT AAACAAGGCA GCTCAAAATA CTGCAGAAGT TAAGAATGAC
CCAGTAGCTA AGGCTGTAAT TCAAATGGCA CAACCAGGTT ACTCAGTTCT TCAACCAAAA
TTGCCACAAA TGTCAATCTT CTGGAACGAC TCAGCTCCAT TAATTAGTGG TGCATACGAC
GGCAAGATTA AGCCATCACA ATACAAGACT AAGCTTGCTA AATTACAAAA GAGTATTTCT
AAGAAAGAAT AA
 
Protein sequence
MVHGCNNVFS LLWLGGNIMK LWKKLALGSV VALSAISLTA CGKSSNSNES KSSDKQLTLW 
VDTARVSWYK GVVKDFEKEH PNIKVKVTQN PNGSANAKTD VGKDPSKAAD VFGVPNDQLG
QMADSGYINP LSPSDTKEIK KNSVPEAYKG AEWKGKLYAY PYAEQAQTVY YDKSKLSPED
VKSWKTMTSK GVVATDFTNA YVMWPVMFSA GTKLFGDSGE EVKGSTFDSQ NGVNAMKWYA
EQKNNKGVMQ TSNALNQLKK GHAQAILDGP WNAANIKKIL GKNLGVAPYP TIELGGKTAQ
MEAFLGIECF AVNSHTSNAK NAAILAKYLS NKENQLIVHK NAGEIPVNKA AQNTAEVKND
PVAKAVIQMA QPGYSVLQPK LPQMSIFWND SAPLISGAYD GKIKPSQYKT KLAKLQKSIS
KKE