Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0216 |
Symbol | |
ID | 4438742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 249010 |
End bp | 251286 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639672076 |
Product | maltose phosphorylase |
Protein accession | YP_814063 |
Protein GI | 116628891 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1554] Trehalose and maltose hydrolases (possible phosphorylases) |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000286832 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.00000374663 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGATGA AGAGAATTTT TGAAGTTGAT CCTTGGAAAG TAACAACGCA TGAATTTTCT AAGGAAGATA AAAGATTACA AGAAAGTATT ACCGCAATTG GTAATGATTA TATGGGAATG AGAGGAAACT TTGAAGAAGG CTATTCTGGC GATACTCTTC AAGGTACCTA TTTAGCAGGT GTTTGGTTCC CAGATAAAAC TGTTGTTGGT TGGTGGAAGA ATGGTTATCC AAAATACTTT GGTAAGACTC CTAATGCACC AAGCTTCATC GGAATTGGAA TTACTGTTAA TGGTGAAAAG CTTGATTTAG CAAAAGTTAA ATTTAGTGAT TTTGAGTTAT CACTTGATAT GCATCAAGGC CTTCTCTCAA GAAGTTTTAT CTATGAAGGA AAAGATGTCA AAGTTAAGTT TGAATTTGAA CGTTTTCTTC ATATTATTCA AAAAGAAGCA GCTCTAATTA AAGTTAAAGC AACTGTACTT GAAGGACATG CAAAAATTGA TTTTGATTCA ACTTTAGATG GAACAGTTGT TAACGAAGAT AGTAATTATG ATGAACGTTT CTGGATCCCA CTTGGTGAAG ATAAGGATAG AAGAACTATC CAAGTAAAAA CTAAGCCAAA TCCATATGAA GTTCCCCAAT TTACGGTTTT ACTTAAGCAA GCATTACGTC ATAACGGGAA AGCACTTCAA GGTGAAGTAA CAACTGACGA AGCTAAGTTA AGTGAAAAGC TTTCGGTTGA ATTAGATCAA GGTCAAAGTT ATGAGCTTGA AAAAGACGTT ATTGTTGTGA CAAGTCGTGA CATTGAAGAG AAAGATCAAG CTGATGTTGC TGAAGACTTC ATGAAAAAGC TGCAAACTAA GAGCTTTGAA GAGAACTTAG CTGAGCATAC AGCTACTTGG AAAAAGCGCT GGGAAACAAG TGATGTTGAA ATTGATGGGG ATGCAGCTGC TCAACAAGGT ATCCGTTTCA ATATTCTTCA ATTGTTTATG ACTTACTATG GTGAAGATGA AAGATTAAAT GTCGGTCCCA AAGGATTTAC CGGTGAAAAA TATGGCGGTG CTACTTATTG GGACACAGAA GCATTTATTG TTCCAATGTA CTTAGCTATT ACTAAGCCAA GTGTTACTAA AGCATTGCTT CAATATCGTC ATAATCAATT ACCAGGCGCT TATCACAATG CTAAAGAACA AGGCCTCCCA GGTGCGTTAT TCCCAATGGT TACTTTTAAT GGTATTGAAT GCCACAACGA ATGGGAAATT ACTTTTGAAG AAATCCACCG AAATGCTGAT ATTCCACATG CAATTGCAAT GTACACCGAA TATACTGGCG ACGATAGCTA TGTTAAAAAC GAAGGCATGG ATGTCTTAGT TGGAACTGCA AGATTCTGGG CAGCTAGAGT TCATTGGTCT AAATGGCGTA ATAAATATGT AATGCATGGT GTTACTGGAC CAAATGAGTA CGAAAATAAT GTTAACAATA ACTGGTTCAC TAGTACTATG GCAAGATGGC TTTTGAAATA TACTTTAGAG CGTTTGCCGC TTGCAACTAA AGAAGCTCAA GAAAGAGTCC ATGTCACTGA GGAAGAAAAA GAAAAGTGGC AAGACATTGT TGATAAGATT TATCTTCCAG AAGATAAAGA TTTGGGTATT TTCTTACAAC AAGATGACTT CCTTGATAAA GAAATTCGCC CAGTAAGCGA AATTGAAGAT CAAAGACCAA TTAATCAGCA CTGGTCATGG GATAAGATTT TAAGATCGCC ATTTATCAAG CAAGCAGATG TATTACAAGG AATCTACTTC TTCCCAGAAA ATTACACTAA AGAACAAAAG GAGAAGAACT TTGATTTTTA TGAACCACTA ACTGTTCATG AAAGTTCATT ATCTCCTTCA ATTCACTCAG TTTTGGCAGC TGAACTAGGG AAGAAAGATA AGGCTGTTGA GCTTTATGAA AGAACTGCAA GGCTTGACTT AGATAATTAC AACAACGATA CGGTTGACGG TTTGCACATT ACTTCAATGA GTGGTTCATG GCTAGCAATC GTGCAAGGTT TCGCAGGCAT GCGTTATGAT CACGATCAAT TAAAATTTAA GCTATTTATC CCAGATAATT GGAATCATTA CAGCTTCAAG ATTAATTATC GCGGTCGCTT GATTGAAGTT TATGTCGATC ATCAAGAAAC TAAGATTTCA CTACTCAAAG GTGAAGATCT CGAGATTTTA GTTAATGATC AAAAAGTTAT GCTAAAAGAA GGTGAAACTG AATGCTTAAA GGCTTAA
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Protein sequence | MMMKRIFEVD PWKVTTHEFS KEDKRLQESI TAIGNDYMGM RGNFEEGYSG DTLQGTYLAG VWFPDKTVVG WWKNGYPKYF GKTPNAPSFI GIGITVNGEK LDLAKVKFSD FELSLDMHQG LLSRSFIYEG KDVKVKFEFE RFLHIIQKEA ALIKVKATVL EGHAKIDFDS TLDGTVVNED SNYDERFWIP LGEDKDRRTI QVKTKPNPYE VPQFTVLLKQ ALRHNGKALQ GEVTTDEAKL SEKLSVELDQ GQSYELEKDV IVVTSRDIEE KDQADVAEDF MKKLQTKSFE ENLAEHTATW KKRWETSDVE IDGDAAAQQG IRFNILQLFM TYYGEDERLN VGPKGFTGEK YGGATYWDTE AFIVPMYLAI TKPSVTKALL QYRHNQLPGA YHNAKEQGLP GALFPMVTFN GIECHNEWEI TFEEIHRNAD IPHAIAMYTE YTGDDSYVKN EGMDVLVGTA RFWAARVHWS KWRNKYVMHG VTGPNEYENN VNNNWFTSTM ARWLLKYTLE RLPLATKEAQ ERVHVTEEEK EKWQDIVDKI YLPEDKDLGI FLQQDDFLDK EIRPVSEIED QRPINQHWSW DKILRSPFIK QADVLQGIYF FPENYTKEQK EKNFDFYEPL TVHESSLSPS IHSVLAAELG KKDKAVELYE RTARLDLDNY NNDTVDGLHI TSMSGSWLAI VQGFAGMRYD HDQLKFKLFI PDNWNHYSFK INYRGRLIEV YVDHQETKIS LLKGEDLEIL VNDQKVMLKE GETECLKA
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