Gene LGAS_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0216 
Symbol 
ID4438742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp249010 
End bp251286 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content36% 
IMG OID639672076 
Productmaltose phosphorylase 
Protein accessionYP_814063 
Protein GI116628891 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1554] Trehalose and maltose hydrolases (possible phosphorylases) 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000286832 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00000374663 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGATGA AGAGAATTTT TGAAGTTGAT CCTTGGAAAG TAACAACGCA TGAATTTTCT 
AAGGAAGATA AAAGATTACA AGAAAGTATT ACCGCAATTG GTAATGATTA TATGGGAATG
AGAGGAAACT TTGAAGAAGG CTATTCTGGC GATACTCTTC AAGGTACCTA TTTAGCAGGT
GTTTGGTTCC CAGATAAAAC TGTTGTTGGT TGGTGGAAGA ATGGTTATCC AAAATACTTT
GGTAAGACTC CTAATGCACC AAGCTTCATC GGAATTGGAA TTACTGTTAA TGGTGAAAAG
CTTGATTTAG CAAAAGTTAA ATTTAGTGAT TTTGAGTTAT CACTTGATAT GCATCAAGGC
CTTCTCTCAA GAAGTTTTAT CTATGAAGGA AAAGATGTCA AAGTTAAGTT TGAATTTGAA
CGTTTTCTTC ATATTATTCA AAAAGAAGCA GCTCTAATTA AAGTTAAAGC AACTGTACTT
GAAGGACATG CAAAAATTGA TTTTGATTCA ACTTTAGATG GAACAGTTGT TAACGAAGAT
AGTAATTATG ATGAACGTTT CTGGATCCCA CTTGGTGAAG ATAAGGATAG AAGAACTATC
CAAGTAAAAA CTAAGCCAAA TCCATATGAA GTTCCCCAAT TTACGGTTTT ACTTAAGCAA
GCATTACGTC ATAACGGGAA AGCACTTCAA GGTGAAGTAA CAACTGACGA AGCTAAGTTA
AGTGAAAAGC TTTCGGTTGA ATTAGATCAA GGTCAAAGTT ATGAGCTTGA AAAAGACGTT
ATTGTTGTGA CAAGTCGTGA CATTGAAGAG AAAGATCAAG CTGATGTTGC TGAAGACTTC
ATGAAAAAGC TGCAAACTAA GAGCTTTGAA GAGAACTTAG CTGAGCATAC AGCTACTTGG
AAAAAGCGCT GGGAAACAAG TGATGTTGAA ATTGATGGGG ATGCAGCTGC TCAACAAGGT
ATCCGTTTCA ATATTCTTCA ATTGTTTATG ACTTACTATG GTGAAGATGA AAGATTAAAT
GTCGGTCCCA AAGGATTTAC CGGTGAAAAA TATGGCGGTG CTACTTATTG GGACACAGAA
GCATTTATTG TTCCAATGTA CTTAGCTATT ACTAAGCCAA GTGTTACTAA AGCATTGCTT
CAATATCGTC ATAATCAATT ACCAGGCGCT TATCACAATG CTAAAGAACA AGGCCTCCCA
GGTGCGTTAT TCCCAATGGT TACTTTTAAT GGTATTGAAT GCCACAACGA ATGGGAAATT
ACTTTTGAAG AAATCCACCG AAATGCTGAT ATTCCACATG CAATTGCAAT GTACACCGAA
TATACTGGCG ACGATAGCTA TGTTAAAAAC GAAGGCATGG ATGTCTTAGT TGGAACTGCA
AGATTCTGGG CAGCTAGAGT TCATTGGTCT AAATGGCGTA ATAAATATGT AATGCATGGT
GTTACTGGAC CAAATGAGTA CGAAAATAAT GTTAACAATA ACTGGTTCAC TAGTACTATG
GCAAGATGGC TTTTGAAATA TACTTTAGAG CGTTTGCCGC TTGCAACTAA AGAAGCTCAA
GAAAGAGTCC ATGTCACTGA GGAAGAAAAA GAAAAGTGGC AAGACATTGT TGATAAGATT
TATCTTCCAG AAGATAAAGA TTTGGGTATT TTCTTACAAC AAGATGACTT CCTTGATAAA
GAAATTCGCC CAGTAAGCGA AATTGAAGAT CAAAGACCAA TTAATCAGCA CTGGTCATGG
GATAAGATTT TAAGATCGCC ATTTATCAAG CAAGCAGATG TATTACAAGG AATCTACTTC
TTCCCAGAAA ATTACACTAA AGAACAAAAG GAGAAGAACT TTGATTTTTA TGAACCACTA
ACTGTTCATG AAAGTTCATT ATCTCCTTCA ATTCACTCAG TTTTGGCAGC TGAACTAGGG
AAGAAAGATA AGGCTGTTGA GCTTTATGAA AGAACTGCAA GGCTTGACTT AGATAATTAC
AACAACGATA CGGTTGACGG TTTGCACATT ACTTCAATGA GTGGTTCATG GCTAGCAATC
GTGCAAGGTT TCGCAGGCAT GCGTTATGAT CACGATCAAT TAAAATTTAA GCTATTTATC
CCAGATAATT GGAATCATTA CAGCTTCAAG ATTAATTATC GCGGTCGCTT GATTGAAGTT
TATGTCGATC ATCAAGAAAC TAAGATTTCA CTACTCAAAG GTGAAGATCT CGAGATTTTA
GTTAATGATC AAAAAGTTAT GCTAAAAGAA GGTGAAACTG AATGCTTAAA GGCTTAA
 
Protein sequence
MMMKRIFEVD PWKVTTHEFS KEDKRLQESI TAIGNDYMGM RGNFEEGYSG DTLQGTYLAG 
VWFPDKTVVG WWKNGYPKYF GKTPNAPSFI GIGITVNGEK LDLAKVKFSD FELSLDMHQG
LLSRSFIYEG KDVKVKFEFE RFLHIIQKEA ALIKVKATVL EGHAKIDFDS TLDGTVVNED
SNYDERFWIP LGEDKDRRTI QVKTKPNPYE VPQFTVLLKQ ALRHNGKALQ GEVTTDEAKL
SEKLSVELDQ GQSYELEKDV IVVTSRDIEE KDQADVAEDF MKKLQTKSFE ENLAEHTATW
KKRWETSDVE IDGDAAAQQG IRFNILQLFM TYYGEDERLN VGPKGFTGEK YGGATYWDTE
AFIVPMYLAI TKPSVTKALL QYRHNQLPGA YHNAKEQGLP GALFPMVTFN GIECHNEWEI
TFEEIHRNAD IPHAIAMYTE YTGDDSYVKN EGMDVLVGTA RFWAARVHWS KWRNKYVMHG
VTGPNEYENN VNNNWFTSTM ARWLLKYTLE RLPLATKEAQ ERVHVTEEEK EKWQDIVDKI
YLPEDKDLGI FLQQDDFLDK EIRPVSEIED QRPINQHWSW DKILRSPFIK QADVLQGIYF
FPENYTKEQK EKNFDFYEPL TVHESSLSPS IHSVLAAELG KKDKAVELYE RTARLDLDNY
NNDTVDGLHI TSMSGSWLAI VQGFAGMRYD HDQLKFKLFI PDNWNHYSFK INYRGRLIEV
YVDHQETKIS LLKGEDLEIL VNDQKVMLKE GETECLKA