| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0207 |
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| Symbol | |
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| ID | 4440345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 239038 |
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| End bp | 239601 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639672067 |
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| Product | ribonuclease M5 |
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| Protein accession | YP_814054 |
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| Protein GI | 116628882 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1658] Small primase-like proteins (Toprim domain) |
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| TIGRFAM ID | [TIGR00334] ribonuclease M5 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00000177928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.0149756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATCAA ATAATCAAAA ACAGTTCAAT GCAGTAGTAG TTGTTGAAGG ACGAGACGAT
ACCAAGAGAT TAAAACAGTT CTTCCCAGGA ATTGAAACTA TTGAAACTAA TGGCTCAGAA
GTATCTGATC AAACTTTAGC AGAGATTAAG AAACTAGCAA AAACAAGAGA AATAATCATC
TTTACTGATC CAGACTACAA TGGTGAAAGA ATTAGAAGAC TAGTGACTAA TGCTGCGCCA
AATGCTAAAC AAGCTTTTAT CACTCGTAAA GAAGGAGAAC CAACTAAGCG TGGAAACAGC
TTAGGAGTTG AACATGCTTC AAAAGAAGCC CTTGTTCGTG CTTTAGGTGA TTTGCACGAA
ATTCAAGCAG TAGAGAGTGA TATTACTAAA GAAAAATACG ATGATTTGGG TCTCGCAGTT
AGTCCGGAAG CTCGTCTTTT ACGTGAAAAA GTTGGAATTA AGTTAGGAAT TGGATATGGA
AATAGCAAGC AATTCTTAAA ACGTTTGAAG ATGTTTGGAA TTACTTATGA TGAATTAAAG
AGGGCAGTTG AAGATGTCAA ATAG
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| Protein sequence | MESNNQKQFN AVVVVEGRDD TKRLKQFFPG IETIETNGSE VSDQTLAEIK KLAKTREIII
FTDPDYNGER IRRLVTNAAP NAKQAFITRK EGEPTKRGNS LGVEHASKEA LVRALGDLHE
IQAVESDITK EKYDDLGLAV SPEARLLREK VGIKLGIGYG NSKQFLKRLK MFGITYDELK
RAVEDVK
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