Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0206 |
Symbol | |
ID | 4440344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 238281 |
End bp | 239051 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639672066 |
Product | Mg-dependent DNase |
Protein accession | YP_814053 |
Protein GI | 116628881 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000000791491 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.0173908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATTT TTGATTCACA TACGCACTTA AATGACGTGC CTTTTCGGGG AAAAGAAGAG ATCTACCTTG ATCGAGCTAA AGAATTAGGT GTAGTAAAAA GTGCAGTTGC AGGACAAGAC CCAGAATTTA ATGAGCGTGC GATTGATCTA AGTCAAAGAT TTGATAATTT ATACGCTATT GTTGGTTACT GTCCTGATGT AGCTAAAGGC TATGATCAAA ATGCAGAAGA TGTATTAGTA GAACAGCTTA AGAAGCCCAA AACTGTTGCT TTAGGAGAAA TTGGACTAGA TTATTACTGG GATGAATCGC CAAGAGATGT TCAGCGAAAA GTTTTTGCAA GGCAACTTGA TTTAGCTCAT AGCTTAAAGA TGCCAGTAAA TATTCATACT CGCGATGCTT TTGAAGATAC ATATCAAGTT TTGAAAAATA GTCATGTGGG TGAATATGGC GGGATTATTC ATAATTTTAA TGGTGATCCA GAATGGCTTA AAAAGTTTCT TGATTTAGGG ATGATGGTTT CATTTTCTGG GGTAGTTTCA TTTACAAAAG CAATTGACGT ACATGCTTCT GCCAAAGTTG TGCCTTGGGA TAAATTTTTA ATTGAAACTG ATGCCCCATA CTTAACGCCA AAACCATACC GCGGAAAGCA AAATGAAACA GGATATGTAC GCTATGTTGC AGAGGCAATT GCTAAGTTGC GTGATGTATC GGTTGAAGAA GTGGCAAAGC ACACATTTGA AAATACGATG AGGGCATATG GAATCAAATA A
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Protein sequence | MEIFDSHTHL NDVPFRGKEE IYLDRAKELG VVKSAVAGQD PEFNERAIDL SQRFDNLYAI VGYCPDVAKG YDQNAEDVLV EQLKKPKTVA LGEIGLDYYW DESPRDVQRK VFARQLDLAH SLKMPVNIHT RDAFEDTYQV LKNSHVGEYG GIIHNFNGDP EWLKKFLDLG MMVSFSGVVS FTKAIDVHAS AKVVPWDKFL IETDAPYLTP KPYRGKQNET GYVRYVAEAI AKLRDVSVEE VAKHTFENTM RAYGIK
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