Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0202 |
Symbol | |
ID | 4440340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 233821 |
End bp | 234309 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639672063 |
Product | deoxycytidylate deaminase |
Protein accession | YP_814050 |
Protein GI | 116628878 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2131] Deoxycytidylate deaminase |
TIGRFAM ID | [TIGR02571] ComE operon protein 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 98 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.131565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGAG ACAGGATTCC GTGGAAGCAA TATTTTATGA TGCAGGCTTT AGTTATTGCA CAACGTTCTA CCTGTGATCG TGCCTTAGTC GGAAGTGTAT TAGTTAAAGA TGACCGGATG ATTGCGACCG GATATAACGG TAGTGTTTCA GGACAGCCTC ATTGTGATGA TGTTGGTCAT CTGATGGTTG ATGGACATTG CGTAAGAACA ATTCACTCTG AAATGAATGC CTTAATTCAA TGCGCTAAAA ATGGTATTTC AACTGAAGGT ACTGAAATTT ACGTTACTTA TTTTCCTTGC TTTAATTGCA GTAAGTGCTT AGTGCAAGCT GGTATTAAGA AAATCAACTA TTATTATGAT TATCATGATA ATCCTTTAGC CTTGAAATTA TTGCGTGAAA AGGGCGTTGC AATTGAACAA GTAACGCTTG ATCATAAATA TGTTCAAAGC TTAGCAGACA GGCTGGAGAA GGCTGACAAT GAAAAATAA
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Protein sequence | MTRDRIPWKQ YFMMQALVIA QRSTCDRALV GSVLVKDDRM IATGYNGSVS GQPHCDDVGH LMVDGHCVRT IHSEMNALIQ CAKNGISTEG TEIYVTYFPC FNCSKCLVQA GIKKINYYYD YHDNPLALKL LREKGVAIEQ VTLDHKYVQS LADRLEKADN EK
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