Gene LGAS_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0201 
Symbol 
ID4440339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp232761 
End bp233801 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content36% 
IMG OID639672062 
Producttryptophanyl-tRNA synthetase II 
Protein accessionYP_814049 
Protein GI116628877 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.231145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGAAAA TTATGACGAA AGAAATTTTA TTAACTGGAG ATAGACCAAC TGGTAAGCTT 
CACATTGGTC ACTATATTGG GTCCTTAAAA AACCGTGTTA AGCTGCAAAA TGAAGGTAAA
TATGAACCTT ACATTATGAT TGCGGATACG CAAGCCTTAA CTGATAATGC AAGAGATCCT
GAAAAAATCA AAAATAGTTT GATTCAAGTA GCTTTAGACT ACTTAGCTGT TGGTTTAGAT
CCTGAAAAAT CTACTATTTA TGTTCAATCG CAAATTCCCG CTCTTTTTGA GTTAACTGCA
TATTACATGG ATTTAGTAAC AGTTGCACGT CTAGAGAGAA ATCCAACCGT TAAAACTGAA
ATTAAGCAAA AGAACTTCAA GGATTCAATC CCTGTAGGAT TTTTAAACTA TCCAGTTTCT
CAAGCAGCAG ATATTACTGC TTTTAAAGCG ACAGTAGTCC CAGTTGGGGA TGACCAAGAA
CCAATGCTTG AACAAACTCG TGAAATTGTA CGTACTTTTA ACCGAGTTTA TAACACTGAT
ATCTTAGTTG AGCCCAAGGG CTACTTCCCG CCAAAGGGTC AAGGAAGACT TCCGGGATTA
GATGGAAATG CCAAAATGTC TAAATCATTA GGAAATGCGA TCTATTTATC CGATGATGCA
AAGACTGTGC AAAAGAAAGT AATGTCCATG TATACTGATC CAAATCACAT CCATGTGGAA
GATCCAGGTC AAGTTGAAGG TAACACTGTC TTTACTTATC TTGATGTATT TGCACCAGAC
AAGGATAAGG TTGCTGAACT TAAAGAACAA TACCAAAAAG GTGGCCTAGG TGACGTTAAA
ATTAAACGTT ACTTAAATAA GGTTCTTGAA GAAGAGCTTG GACCAATCAG AGAACGTCGT
GAAAAGTTTG CTCAAAATCC AGATGCTGTT TATGAAATGC TACTAGAAGG ATCAAAGAAG
GCAAATGAAG TTGCTAATCA GACTCTACAA GAAGTTAGAG AGGCAATTGG TTTAAATTAT
TTTGATAGAT TAAATAAATA A
 
Protein sequence
MEKIMTKEIL LTGDRPTGKL HIGHYIGSLK NRVKLQNEGK YEPYIMIADT QALTDNARDP 
EKIKNSLIQV ALDYLAVGLD PEKSTIYVQS QIPALFELTA YYMDLVTVAR LERNPTVKTE
IKQKNFKDSI PVGFLNYPVS QAADITAFKA TVVPVGDDQE PMLEQTREIV RTFNRVYNTD
ILVEPKGYFP PKGQGRLPGL DGNAKMSKSL GNAIYLSDDA KTVQKKVMSM YTDPNHIHVE
DPGQVEGNTV FTYLDVFAPD KDKVAELKEQ YQKGGLGDVK IKRYLNKVLE EELGPIRERR
EKFAQNPDAV YEMLLEGSKK ANEVANQTLQ EVREAIGLNY FDRLNK