Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0192 |
Symbol | |
ID | 4440330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 226068 |
End bp | 226394 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639672053 |
Product | cellobiose-specific PTS system IIA component |
Protein accession | YP_814041 |
Protein GI | 116628869 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1447] Phosphotransferase system cellobiose-specific component IIA |
TIGRFAM ID | [TIGR00823] phosphotransferase system enzyme II, lactose-specific, factor III |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.176406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAAG AAAATAGCGA TAACATGCAA GTTGTAATGG GAATTATTAT GCAAGCAGGT AATGCAAAAG CTGCTGCTAT GCAAGCAATC CAAGCTGCTA AAAAAGGCGA CTTTGACAAG GCTGATGAAT TTATTAAGCA AGCAAATGAA GGCTTAGTAA ATGCTCACAA TGTTCAAACT GATATGTTGA CTCAAGAAGC ACAAGGTAAC CATGTAAAAG TTGACCTTTA CATGGTTCAC GCTCAAGACC ACTTGATGAC AGCTATTACC TTTATTGATT TAGCTAAAGA AGTAGTAGCT GTTTACAAAA AAATGGCTGA AAAATAA
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Protein sequence | MAQENSDNMQ VVMGIIMQAG NAKAAAMQAI QAAKKGDFDK ADEFIKQANE GLVNAHNVQT DMLTQEAQGN HVKVDLYMVH AQDHLMTAIT FIDLAKEVVA VYKKMAEK
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