Gene LGAS_0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0192 
Symbol 
ID4440330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp226068 
End bp226394 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content36% 
IMG OID639672053 
Productcellobiose-specific PTS system IIA component 
Protein accessionYP_814041 
Protein GI116628869 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1447] Phosphotransferase system cellobiose-specific component IIA 
TIGRFAM ID[TIGR00823] phosphotransferase system enzyme II, lactose-specific, factor III 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.176406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAG AAAATAGCGA TAACATGCAA GTTGTAATGG GAATTATTAT GCAAGCAGGT 
AATGCAAAAG CTGCTGCTAT GCAAGCAATC CAAGCTGCTA AAAAAGGCGA CTTTGACAAG
GCTGATGAAT TTATTAAGCA AGCAAATGAA GGCTTAGTAA ATGCTCACAA TGTTCAAACT
GATATGTTGA CTCAAGAAGC ACAAGGTAAC CATGTAAAAG TTGACCTTTA CATGGTTCAC
GCTCAAGACC ACTTGATGAC AGCTATTACC TTTATTGATT TAGCTAAAGA AGTAGTAGCT
GTTTACAAAA AAATGGCTGA AAAATAA
 
Protein sequence
MAQENSDNMQ VVMGIIMQAG NAKAAAMQAI QAAKKGDFDK ADEFIKQANE GLVNAHNVQT 
DMLTQEAQGN HVKVDLYMVH AQDHLMTAIT FIDLAKEVVA VYKKMAEK