Gene LGAS_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0175 
Symbol 
ID4438821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand+ 
Start bp208335 
End bp208979 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content36% 
IMG OID639672036 
Productmembrane protein 
Protein accessionYP_814025 
Protein GI116628853 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0135972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0000000000000402591 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACGGA GATCGTGCTT ATTAATGAAT GAATTGATTT CACTAGTAAT AGGATATTTC 
CTCGGAAATA TCCTTTTTGC TATGATTGTC GCAAAAATAT TTTTACATAA AGATCCAACT 
AAGTATGGTT CAGGTAATCC TGGCACAGCT AATATTGGCG CAGTTTTTGG TAAAAAGTGG 
GGTATTCTCA CTTGTATCGG AGATTTAGCT AAGACTTTGG CAGCGTTGTT AATTGTTTAC 
TCTCTTTATC ATGGTAATCG TTTAGATTTG TCTTTTGCCG GTCTTGGCGT AGTCTTAGGG 
CATTCATTTC CGTTCTGGAA TCACTTCAAG GGTGGTAAAG GAGTGGCAGT TACTGCATTA 
TGGCTTGTCT TTTTCGATTG GCGAGCTGGC TTAATTGCTT TATTGTTTGG CTTGTTTTTA 
GTGATTATTA TGAAAAATCT TACAATTCCG CCACTTGTCT ATATGTTGGG TTTCAGTATT 
TTTACTTGGC TTAACTTTGG TTGGGAACAA GGATTAATCT TTTTAATTGC TACTTTAATT 
ATGATTTTTC AATTTAGAAA AGACATTGTT GACTTCTTTA CCGGACACGG TAAGCGAGTG 
GATGTTTTGG TAACAATTAA GAAAAAGTTA GGGATATACA AATGA
 
Protein sequence
MERRSCLLMN ELISLVIGYF LGNILFAMIV AKIFLHKDPT KYGSGNPGTA NIGAVFGKKW 
GILTCIGDLA KTLAALLIVY SLYHGNRLDL SFAGLGVVLG HSFPFWNHFK GGKGVAVTAL 
WLVFFDWRAG LIALLFGLFL VIIMKNLTIP PLVYMLGFSI FTWLNFGWEQ GLIFLIATLI 
MIFQFRKDIV DFFTGHGKRV DVLVTIKKKL GIYK