Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0170 |
Symbol | |
ID | 4440524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 203272 |
End bp | 204204 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639672031 |
Product | glycosyltransferase-like protein |
Protein accession | YP_814020 |
Protein GI | 116628848 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000142505 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 7.37395e-16 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAT TATCAATTAT TGTTCCTTGT TACAATGAAG AGGAATCTGT ACCACTTTTT TATCCAGCTG TGAATAAAGT AATGGATACA ATTCCAGATT TAGAGCCAGA ATATTGGTTT ATTAATGATG GTTCCAAAGA TAATACACTT AAAGAAATTA AAGAATTACG CAAAAAAGAT CCAGAACATG TTCACTTTGT TTCTTTTTCA AGAAACTTTG GTAAGGAGTC CGCACTTTAT GCCGGACTTC AAGCTGCAAC TGGAGACTAT GTAGTCGTAA TGGATGTTGA CTTACAAGAT CCACCTAAGT TTTTGCCGCA AATGTATGAT TTGATCAAGA CGGGAGAATA TGACTGTATT GGAACTCGTC GGGTTGACCG TACAGGGGAA GCTAAGTTTA AGTCTTTCCT AAGTGATATG TTCTATAAGG TTGTTAATAA GATTTCTGAT ACTGAAATTG TACCAGGCGC CCGTGACTAC CGAATGATGA CTCGTCAGAT GGTAAATGCA GTTTTGGATA TGCCTGAATA CAACCGTTTT TCAAAAGGAA TCTTCTCTTG GGTTGGATTT AAGACTAAGT ATTTAGACTA CCACAATGTT GAACGTGTAG CTGGCGAAAG TGATTGGAAC ACTTGGAAAT TATTCAAATA CGCGATGGAC GGAATTGCGG ACTTTTCACA AGCGCCACTT AACTTAGCCG TTTGGATTGG TACTGGCTCA TTTGTATTAT CAATTATTGG CTTGATCATT GTAATTATTC GCAGAGCACT CTACCCTGGT TCAAGCATCT TTGGCTGGGC TTCAATGGTA TGCATTATTT TGCTACTGGG TGGTCTGCAA CTACTCTGCA TTGGTATTTT GGGTAAATAC ATTGGTAGGG TATATATTCA AGTTAAGAAT CGACCGATTT ATATTATTAA AGAGAAAAAA TAA
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Protein sequence | MKKLSIIVPC YNEEESVPLF YPAVNKVMDT IPDLEPEYWF INDGSKDNTL KEIKELRKKD PEHVHFVSFS RNFGKESALY AGLQAATGDY VVVMDVDLQD PPKFLPQMYD LIKTGEYDCI GTRRVDRTGE AKFKSFLSDM FYKVVNKISD TEIVPGARDY RMMTRQMVNA VLDMPEYNRF SKGIFSWVGF KTKYLDYHNV ERVAGESDWN TWKLFKYAMD GIADFSQAPL NLAVWIGTGS FVLSIIGLII VIIRRALYPG SSIFGWASMV CIILLLGGLQ LLCIGILGKY IGRVYIQVKN RPIYIIKEKK
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