Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0151 |
Symbol | |
ID | 4440540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 183747 |
End bp | 185468 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639672012 |
Product | hypothetical protein |
Protein accession | YP_814001 |
Protein GI | 116628829 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000527907 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.000000000576064 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTAGAAA AAATAAAAAC TAATAAATTT TGCCAATTTA TCTGGCCGTA TCTCTTAATT ATTTTGGCCA CTACAATTGT TATCTCGCCG CAATTAATTT CGCATACTAT CCTAGCTAGC GATGATACGG CAGATACCTT GTTTCACTAT AGTCGTTTCT ATGATGCAGG AATGCAGCTA AAAACTGGAA TTTTTAGCAT CTTTCAAACT AATTTTACCT TCCAGCAGAG CGGTAGAATT ATTAATGCAA TTTATGGACC GTTATTTGCA TACTTTAATG GAATTTTAGT TCTTATTGCG GGTAATTGGT TTAATTATCA AGTCATTTTA GCCTATGTTA TTTCGCTATT AGGTGCTGGG AGTATGTATT ACTTACTTCA AAAAGTAGGT ATTAATAAAC TACTAGCTAC AGTAATAGGA ATTATTTACA TTAACATTGG GATGATTCCA GCCTTTATTA ACCGTAGTTC ATTTAACGGT TGGGGACAGG CATTAATGCC GTTAGTTGTG TTATGCGGCG TACGCATGAT TCAAGATAAA GAGAAACCAA TTAACTGGAT TCAGCTAATG TTAGTAATGA GTTTGCTAGT GCAAGTTCAT GTTTTGAGCA CTTTAATGGC AGCTCTTTTA TTAATTCCTT TCTTTATCTA TTCCTTAATT ATTAATTATA ATTCTAAAAA GGTGTGGATC CCTTTTATTA AGGCTGTTGT CGGAACAATA GTATTATCAG CTAATGTAAT TGGGGCTTTT TTAGTTTTAA TGCCTAATAA TCATTTAGCT GCGAATACTG AATTTGATCT GTCTCGTGGC GGGTTACGTC CACATGTGCT GTGGCATAAC GAATATGGCA CAGCTTTTGC CTATATTTTG CCAATTTTTG TTTTATTAAT TATTGCGCAA TTTGTTTATG TCGTAATGCA CTACAAAAAA GATAGATTAA ATACTTTTGT AACTATTTGG GGTACGGTTT TATTAGGACT GTCTTCATTT GTTTTTCCTT GGGGATTGGT TCAACGCATT TTTCCAAGCT TGAAGTCATA CTTCCAATTT CCGTTTAGAT TAACTGTTGT TGCCTATCCA TTAATTTTAC TAGGGATGGC ATTAACTATT AATCAGTTAC TAAAACAAGG AGTTAAACCA AGAGCAGTTG GAATTAGTTT AGTGGTAGTT CTTCTTTTAG AAGCTGCTGT ACCAAATATC ATTACTAATC ACATCTTTAC TGTTGCTTGT GGAAAAGATG CGCAAGTTCA AACAGTAGCT AAAGCATCAA ACAGTGATCA GATGCTTAAG ATGTTGAAAT GGCACTACTT GCCTGATTAT TTACCAACTA AAGACAAGTC TATTGACCAA AATGCAGCTT ATCTTTACAA ACTAAATGTA GTTGATCAAT ATCAAAAATT TAATCATAAA GTTGCTAAAA ATGGTGATTT GATTCTTTCT TGGAAAGGAA AAAAGGATAA AGATATTGTC TTGCCCGTTG TTTTATACAA GCAAAGTGAA TTAACTGTGA ACAGTAAGAA ATTCACTGGT GCAAAAAACG TAATTGGAAA TCCAATTATT TCGCAAAAGT CAGGTCTCAA TCGTGCTGTT TTGCGTTTTA TTGCTCCAGC TTGGTTCTAT GTAGTCAGCG CAATTTCGTT AATAGCATGG CTCAGCGTAC TTGTATTTTA CCTGTGGAAA AAATTTATTA ATAATAACAA CAACAAAATA AAAGTTGCTT AA
|
Protein sequence | MLEKIKTNKF CQFIWPYLLI ILATTIVISP QLISHTILAS DDTADTLFHY SRFYDAGMQL KTGIFSIFQT NFTFQQSGRI INAIYGPLFA YFNGILVLIA GNWFNYQVIL AYVISLLGAG SMYYLLQKVG INKLLATVIG IIYINIGMIP AFINRSSFNG WGQALMPLVV LCGVRMIQDK EKPINWIQLM LVMSLLVQVH VLSTLMAALL LIPFFIYSLI INYNSKKVWI PFIKAVVGTI VLSANVIGAF LVLMPNNHLA ANTEFDLSRG GLRPHVLWHN EYGTAFAYIL PIFVLLIIAQ FVYVVMHYKK DRLNTFVTIW GTVLLGLSSF VFPWGLVQRI FPSLKSYFQF PFRLTVVAYP LILLGMALTI NQLLKQGVKP RAVGISLVVV LLLEAAVPNI ITNHIFTVAC GKDAQVQTVA KASNSDQMLK MLKWHYLPDY LPTKDKSIDQ NAAYLYKLNV VDQYQKFNHK VAKNGDLILS WKGKKDKDIV LPVVLYKQSE LTVNSKKFTG AKNVIGNPII SQKSGLNRAV LRFIAPAWFY VVSAISLIAW LSVLVFYLWK KFINNNNNKI KVA
|
| |