| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0149 |
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| Symbol | |
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| ID | 4440538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 179632 |
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| End bp | 181563 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639672010 |
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| Product | phosphotransferase system fructose-specific component IIB |
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| Protein accession | YP_813999 |
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| Protein GI | 116628827 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB
[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR00848] PTS system, fructose subfamily, IIA component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.00000221373 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTCAAT ATGATTTAGT CGGGGCAACG GGCTGCGCTA CGGGAGTTGC CCATACTTTT
ATGGCTGAAG AAGCTTTAGA AAAAGCTGCC CAAAAGTTAG GTTATAAGAT CAAAATTGAA
ACACATGGTC AAACTGGTGT TGAACATGAG CTTACGCCAG AAGAAATAAA AGCGGCGAAA
GGTGTTGTTA TTGCTTCTGA TGTTGATGTT GATCCAGATC GTTTTGCTGG AAAAAGAGTA
GTAATTGTTC CAGTTGCCAA AGGTATCAAA GAACCTGAAA CTTTAATTAG AGAGGCATTG
AGTTCAGAAA CGCCAATTTA TAAACCAGGA CAAACGGCCA AAAGTTCTAC TGGAAAAAGT
AGTGCTGGTG CTGAAAAATT AGGCACTAAA ATTTATACTT CATTAATGAA TGGTGTTTCC
CACATGTTGC CATTTGTTGT GGCTGGTGGT GTTTTGATTG CTGTTTCATT CTTCTGGGGT
ATTTATTCAG CTGACCCTAA GAGCAGTCAG TATAATCAAT TTGCTTATAT GCTAAATACA
ATTGGTAGCA CAACCATGGG ATTGATGGTT CCAGTTCTAG GTGCCTTTAT TGCAGAAGCC
TTAGCTAAAA GATCAGGGCT AGTTGTTGGT TTTGCGGCCG GGATGATTAC TAGCGTTGGT
GGTGGCGGCT TCTTAGGTGC GATCATTGGT GGTTATTTAG CTGCCGTTGT AGTACTTTTA
CTGCAAAAAT TAATGAAGCC ATTGCCAGAC AAAGAATTCC GAGGATTAAA ATCAATTTTC
TTATTGCCTG TATTAGGGGT ATTTATCACT GGTGCAATCA TGTTCTGGTT GAATGGACCA
ATTAAGGCAA TTAACACAGG AATGATGTCT TGGCTAAAAG GTTTTGAAAA TTCAAGTCCA
ATTCTTTTAG GTATTATCAT TGGTGTAATG TGTGCCTCTG ACTTTGGTGG ACCAATTAAC
AAAGCTGCTT ATGTAACTGG TACTGCACTT CTTGCTCAAG GTAACTATTA CTTCATGGCG
GGTGTATCTG CTGCATGTAT TGCACCGCCT CTAGCAACTG GTTTTGCAGT TTTATTAAAT
AAGAAGGCAT ATTCTAAGAA CGAGCGTACT GCTGGATATG TTAACTTCTT GTTAGGATCA
ACCCACATTA CAGAAGGTGC AATTCCATTT GCTGCTAAAC ACCCATTATG GAATATTCCA
GCATTTATGG TCGGCTCAGC AATTGCCGCA GCTTTGACTT ATGTTTCTAG AATTCAAGTT
CCAGCTCCTC ATGGCGGTTT TATTATTTTG CCACTAGTTA ATAAGCCATT TCTATGGGTA
TTGTGGATTG TAGTTGGTGC ACTTGTTTCC GGAGTTTTAC TAGCTTTAAT TGCTGGTAGA
TTTGCTAAGA CAGAACCACA ATTTGAAGAT GGTCCAGATA TTGATGTCTT TGGTGAAGAA
GAAAATGTTA ACAAGCCAGT AGCTGAAAAA GAAACTACTG ATTATAATCT TAAAGATATT
TTGGATACTC AAAATATCAA AATTAATGTT GATGTTCCAG ATAAAGATTC AGCGCTTAAG
TATTTAGCTA ACTTTGCTGT AAAGAATGGC TTAGCTAGTG ATAGCGAAGA AGTTTATGAT
AAATATTTAG CTAGAGAAAA GGAAAGCTCT ACAGGGATGA CTGATGGTTT TGCAATTCCA
CATGCACAAT CTGCTGCTAT TAAGCAATCT GCCATGCTTG TTTTGAAGTT GAAAAATCCG
ATTGATTGGA ATTCCTTAGA TGGGCAAAAG ATTGATACGG TGATTTCTTT CTTAATTCCA
GCAAAGGACA GTAAGACTCA TTTACAGTAC TTATCTAACA CGGCTAAATT GCTTACTCAT
AAAGACTTTA TTGAAAAATT GAAAGAAGCT AAAACGCCAG AAGAGATTAA GAAGTTATTT
GATGGAGAAT AA
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| Protein sequence | MAQYDLVGAT GCATGVAHTF MAEEALEKAA QKLGYKIKIE THGQTGVEHE LTPEEIKAAK
GVVIASDVDV DPDRFAGKRV VIVPVAKGIK EPETLIREAL SSETPIYKPG QTAKSSTGKS
SAGAEKLGTK IYTSLMNGVS HMLPFVVAGG VLIAVSFFWG IYSADPKSSQ YNQFAYMLNT
IGSTTMGLMV PVLGAFIAEA LAKRSGLVVG FAAGMITSVG GGGFLGAIIG GYLAAVVVLL
LQKLMKPLPD KEFRGLKSIF LLPVLGVFIT GAIMFWLNGP IKAINTGMMS WLKGFENSSP
ILLGIIIGVM CASDFGGPIN KAAYVTGTAL LAQGNYYFMA GVSAACIAPP LATGFAVLLN
KKAYSKNERT AGYVNFLLGS THITEGAIPF AAKHPLWNIP AFMVGSAIAA ALTYVSRIQV
PAPHGGFIIL PLVNKPFLWV LWIVVGALVS GVLLALIAGR FAKTEPQFED GPDIDVFGEE
ENVNKPVAEK ETTDYNLKDI LDTQNIKINV DVPDKDSALK YLANFAVKNG LASDSEEVYD
KYLAREKESS TGMTDGFAIP HAQSAAIKQS AMLVLKLKNP IDWNSLDGQK IDTVISFLIP
AKDSKTHLQY LSNTAKLLTH KDFIEKLKEA KTPEEIKKLF DGE
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