| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0144 |
|---|
| Symbol | |
|---|
| ID | 4440533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 172214 |
|---|
| End bp | 173530 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639672005 |
|---|
| Product | major facilitator superfamily permease |
|---|
| Protein accession | YP_813994 |
|---|
| Protein GI | 116628822 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00484994 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.343397 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGAGG CAATTTGCCT CTTTTTTTTT ACGCTCGTGC AAAATAGTTC ATTAATTGCT
AGACTGAATG TAAGAGTCTT AGAGAAAAGG GTGAAAAAAG TGCACGGTAA ACAGAATATT
CAACCAGATG ATGAAATTAA GCTTCATTGG CTCCTATTAG GTGAGTTATT TACCTGGATT
GGAGCTAGTT TTATCTGGCC ATTGACTTCA GTTTATTTAA ATAAAAGGCT GCATGTATCT
TTGGCAATGA TTGGGATTGT GTTGCTCTTT AACTGTTTAG CTAATATGCT TGGCTCCTTT
GTCGCAGGTT GGGCGTATGA TCATTTCAAT CCCTATTATT TAATTATTGC AGGAGCAGGT
TTAGATGCCT TAGTTTTGTT TGGAATGGCT GCTAATCATA CTTGGCCGAT TTATTGGGTC
TGGATGACTT TAACTGGGCT ACTTGGTGGC TGGAATGGGG CTTTAATTAA TTCAATTGCA
ACTAGTATTA AGTCTAAGCC TGGCAGGTAT GTTTTTAATA CGATCTATTT TGCACAGAAT
CTAGGTGTGG TACTTGGTAC ATTGATCGTG GGTTATATTT ACGATTATTC CGTTACGATT
TTATTCGTTA TTGCAGCTAG TCTTTTCGTG ATTGTATGTA TAAACTCAAT TATTAATTAT
CGTCCAATTA TTAAGTTTCA TTTGGAAAGA AAAGCTCAGC AAAATACTAA TAGTAAAAAT
AAGACCACAC CAATGCCGGG TGCTAATTTG AAATTAACTA TTGGCTTTTT TACTACTCTA
GCTGTGATCT GGTTAATGTA CATGAACTGG GAATCTAACC TTTCAGTTTA TATGGTTTCT
TTGGGCATTC CATTTCATTT ATATAGTTTA CTTTGGACGA TTAATGCCAG CATTATTGTG
ATTGTACAGG CTTTTTTAAG TCGTTTTCCT AATACTTTTA AGAATTTATT CCATCAGGTT
GTGTTCGGAG TTACAATGTT TGCTATCTCT TTTGTGACTT TAATTTTCGC GAAAGATTAT
GCGCATTTTG TGTTTTCAAT GGTTACTTTG ACTTTAGGTG AATCAACTGC AATGCCGGCA
ATGCCAGCTT ATGTAAATGA TTTATCTCCA GTTGAAAGTA AAGGAAAATA TCAAGGATTA
ACGATTTCAA CGTCTGCGAT TGGTAGAGCG TTTGGTCCTT TATTTGGAGG GTTAGTGATT
GATAAGTTTG GCTATATCAA TTTCTTTATT GTAGCTGCAG CTGGAATCTT TATGATGCTG
GCAATTATCG TGCCACTTCA CGCACAGTTG AAAGATAAGC TGAAAATATT TAGGTAA
|
|---|
| Protein sequence | MKEAICLFFF TLVQNSSLIA RLNVRVLEKR VKKVHGKQNI QPDDEIKLHW LLLGELFTWI
GASFIWPLTS VYLNKRLHVS LAMIGIVLLF NCLANMLGSF VAGWAYDHFN PYYLIIAGAG
LDALVLFGMA ANHTWPIYWV WMTLTGLLGG WNGALINSIA TSIKSKPGRY VFNTIYFAQN
LGVVLGTLIV GYIYDYSVTI LFVIAASLFV IVCINSIINY RPIIKFHLER KAQQNTNSKN
KTTPMPGANL KLTIGFFTTL AVIWLMYMNW ESNLSVYMVS LGIPFHLYSL LWTINASIIV
IVQAFLSRFP NTFKNLFHQV VFGVTMFAIS FVTLIFAKDY AHFVFSMVTL TLGESTAMPA
MPAYVNDLSP VESKGKYQGL TISTSAIGRA FGPLFGGLVI DKFGYINFFI VAAAGIFMML
AIIVPLHAQL KDKLKIFR
|
|---|
| |