Gene LGAS_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0135 
Symbol 
ID4440559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp147792 
End bp149741 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content36% 
IMG OID639671996 
Productasparagine synthase (glutamine-hydrolyzing) 
Protein accessionYP_813985 
Protein GI116628813 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID[TIGR01536] asparagine synthase (glutamine-hydrolyzing) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000081713 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.012193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGAA TTTGTGCGTT TTTCGATCCT GAATTGAAGG ATAAAGACTG TGCTATTCAA 
GGAATGATGG ACACGATCAA GCACCGTGGG CCATCTTCAG ATGGAAAATA TACTAATGAT
CAGGTGGCTT TAGGCTTTAG GCGTTTGTCA ATCATTGATC TGCGTGGCGG AAGTCAACCT
ATTTTTAATG AAGATAAAAG TAGAGCAATT ATTTTTAATG GTGAAATTTA TAACTTTAAG
CCATTAAGAA AAGAATTAAT TGATGCTGGC CATACTTTTA CTACTAAGGC TGATACTGAA
GTTCTACTTC ATGGCTATGA AGAATGGGGA ATGGACGGCT TATTGAAGCG CGTTCGCGGT
ATGTTTGCCT TTGTAATTTG GGATGACAAT ACTAAGACTT TATATGGTGC ACGTGACTTC
TTTGGAATTA AGCCAATGTA TTATTCAGAC CAAAATGGTA AGTTGATCGT TGGTAGTGAA
TTAAAGAGTT TCTTAGCTTA TCCTGGTTTT AAGAAGGAAC TAAATACTGA AGCAGTTAAA
CCATACTTGA TGAATCAATA TAATGACTTA AAGGAAACTT TCTTTAAGGG TGTTTACCGT
TTCCCAGCAG GTCACTGGTT TGAATATAAA GATGGTAAGA TGAAGACTCA TCAATACTGG
GATGCTAAGT ATGTTGAAAA TAGCTTAAGT TTTGAAGAAA CTTTAGATAA GATCAACGAA
GATTTAAAGG AAACTGTTGA CTTATACAGA AACGCTGACG TTCCAGTTGG TGCTTTCTTA
TCTGAAGGTA TTGATTCTTC TTATTTAACT AGCTTACTTG ATCCTGAAGA TGTCTTTTCA
GTTTCTTTTG ATGATTCAAC TTATAATGAA GCATCAAAGG CTAAGGCACT TTCTGATTTA
CATGGCTGGA AGTTTTTCGC TGATAAGGTT GATGCAGATG AAGCCATGCG CGACTTCCCA
GAAATGCAAT ATCACATGGA TGAACCAGAT GCTAACCCAT CAATTATTCC ATTATGGTAC
TTGTGTAAAT TAGCTAGAAA ACATGTTACT GTTGCTCTTT CTGGTGAAGG TGCTGATGAA
TTATTTGCCG GCTATGTAAA CTATGGAATG CATACGCATA ACGACGTAAT TAAGGTCTTT
ACTGCTGGCT TGAAGAAATT ACCTAAGAAG AGCCGTGTAC GTTTAGCTCA TAAGATCAAG
AAAATGCCTA ACTTTCCAGG TAAAGTACAT ATGTACACTA ACCTGGCAGA ACCAAGCGAG
TTTTACGTTG GTCAATCCGT AATTTATGAC ATGGATTATC CAACTATCTT TACTTCTAAA
GATGCTAATA ATATCTTACG TGATAAGTAC AAGAACGATT TGACTGTTAA TGGCATTTAT
CAAGAAGATT TCAAGAAAGT TAAGAATATT GATGAAGTTA AGCAAATGCA ATATATTGAT
CTTCACCACT TTATGCTTAA TGATATTGAA CAAAAGGCAG ATAAGATCTC AATGGCTCAC
TCATTAGAAT TACGTGTACC ATATCTTGAT AAGAAGATTG CCGAACTTGC TAATTCAATT
CCAACTAAGT ATTTAGTTAA CCGTCATGAT ACTAAATATG CTCTTCGTAA GGCCTCTGAA
AAAGTCTTGC CAGAAGAATG GGCACAAAGA CCTAAACTTG GTTTTCCAAC TCCAATCAAG
CAATGGCTTA AGGAACCTAG ATTCTACAAG CAAGTTAGAG AATTGTTTAC TGAAGACTTT
GTAAATGATA TTTTTGACCA GAAGAAGATT GTTAAGTTAC TTGATGATAA TTATAAAGGC
GATGGATCAG CTCGTCGTCA AATTTGGGCA ATTTATACTT TCTTAGTATG GTACAAATTA
TTCTTTGTTG ACTATGATGA AACTGTTAAA AAGTATCAAC ATGTTCAACC AGAAGTGGCA
GAATTAATCG AAAGTGGCAG ACTTGTTTAA
 
Protein sequence
MCGICAFFDP ELKDKDCAIQ GMMDTIKHRG PSSDGKYTND QVALGFRRLS IIDLRGGSQP 
IFNEDKSRAI IFNGEIYNFK PLRKELIDAG HTFTTKADTE VLLHGYEEWG MDGLLKRVRG
MFAFVIWDDN TKTLYGARDF FGIKPMYYSD QNGKLIVGSE LKSFLAYPGF KKELNTEAVK
PYLMNQYNDL KETFFKGVYR FPAGHWFEYK DGKMKTHQYW DAKYVENSLS FEETLDKINE
DLKETVDLYR NADVPVGAFL SEGIDSSYLT SLLDPEDVFS VSFDDSTYNE ASKAKALSDL
HGWKFFADKV DADEAMRDFP EMQYHMDEPD ANPSIIPLWY LCKLARKHVT VALSGEGADE
LFAGYVNYGM HTHNDVIKVF TAGLKKLPKK SRVRLAHKIK KMPNFPGKVH MYTNLAEPSE
FYVGQSVIYD MDYPTIFTSK DANNILRDKY KNDLTVNGIY QEDFKKVKNI DEVKQMQYID
LHHFMLNDIE QKADKISMAH SLELRVPYLD KKIAELANSI PTKYLVNRHD TKYALRKASE
KVLPEEWAQR PKLGFPTPIK QWLKEPRFYK QVRELFTEDF VNDIFDQKKI VKLLDDNYKG
DGSARRQIWA IYTFLVWYKL FFVDYDETVK KYQHVQPEVA ELIESGRLV