Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0128 |
Symbol | |
ID | 4440552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 141321 |
End bp | 141815 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639671989 |
Product | universal stress protein UspA-like nucleotide-binding protein |
Protein accession | YP_813978 |
Protein GI | 116628806 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000000319103 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0000000012302 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTAAAAG ATTATGACAA CATTTTAGTT CCTGTTGATG GATCTGAAAC AGCAGAGCGT GCATTTGATA AGGCAGTAAA GATTGCCCTT GATAATAACG CTCACTTAGA TGTATTAAAC GTTATCGATA CTCGTCAATT CATGGGGGAA ATGCAAGATA CTTTGATTTC CGGAGATACT ATTTATCAAA TGACCCAAGA TTCTGAGGAG TATCTTAAGA GCTTAAAAGA ATGGGCTAAG GAACACTTTG ATTTTACCGA TGTTTCTTAT CACATTCGTT ATGGTTCACC TAAGAGAATC ATTGCGGTTG ATTTCATTAA GGACCACCAC AATGACTTAA TTATTATGGG TGCAACTGGT ATGAACGCAG TTGAAAGAAT GTTAATGGGA AGCGTTACTG CTTACGTTAA CCAACATGCA TTATCTGATG TTTTAATTAT TAAGACTGAT ATTGATAATA AAAAAGTTGC CAAACCTAAG AAAAAACTTT TCTAA
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Protein sequence | MVKDYDNILV PVDGSETAER AFDKAVKIAL DNNAHLDVLN VIDTRQFMGE MQDTLISGDT IYQMTQDSEE YLKSLKEWAK EHFDFTDVSY HIRYGSPKRI IAVDFIKDHH NDLIIMGATG MNAVERMLMG SVTAYVNQHA LSDVLIIKTD IDNKKVAKPK KKLF
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