| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0126 |
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| Symbol | |
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| ID | 4440550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 139610 |
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| End bp | 140347 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639671987 |
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| Product | transcriptional regulator |
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| Protein accession | YP_813976 |
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| Protein GI | 116628804 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000292092 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0000000000517397 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGATACATA TTATGGATAT TCCAAAATAT TTACAAATTG AAAATGAGTT AAAAAAAGAA
ATCATCTCCG GTAAATTTAA ATACGGAGAT AAATTCTATA GTGAAGCTCA ATTAAAAGAT
AAATTTAATG TTTCTTCGAT TACTGTTATC AGATCTGTCA AAGACCTAGT TAAGGCGGGC
TATTTGGTTC GTCACCAAGG AAAAGGCACG TTTATTTCAC GTTCAAGAAA GGACAAGTTA
GTTCGTCTAA GTGATAATGA GGTCTTCTCT GACAACCAAC AAGAAGATAG AGTTGAAGTA
TTAAAACTTC AAGAAAATAA TAAACCAGAC ATACTTGAAA GGCTTGGTTT ACCAAAATAT
GATAGTTATT ACTATATTGA ACGTTTACGT TTAATTGGCG ATAAGCCTTT CATGTTACAC
CGTTCATTTA TCCCAGCCAA ATTCATCAAT AGAAATTTGG CTAAAGATCC AAATAACTAC
CACAGCATAT ATGAGACTTT ACAAAAAGAT AAGCAATTAT ATCTATTTGA TGAGCCATTT
ACAGAAACGG ATACAATCAT ACAAGCAGAC GATAAAATCA GTCAACGACT AAATATTGCT
AAAGACTATC CAGTTGTACG CCAAGTTAAG AAGACTATCT TAAGTGCAAC AGGTGAAGTT
GTTGAATTAG TAATCGGATA TAAACGCTGC GACTACTTCT CACTTTCGTT TTCAAGTACT
GATTATCCGG AAGTTTAA
|
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| Protein sequence | MIHIMDIPKY LQIENELKKE IISGKFKYGD KFYSEAQLKD KFNVSSITVI RSVKDLVKAG
YLVRHQGKGT FISRSRKDKL VRLSDNEVFS DNQQEDRVEV LKLQENNKPD ILERLGLPKY
DSYYYIERLR LIGDKPFMLH RSFIPAKFIN RNLAKDPNNY HSIYETLQKD KQLYLFDEPF
TETDTIIQAD DKISQRLNIA KDYPVVRQVK KTILSATGEV VELVIGYKRC DYFSLSFSST
DYPEV
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