| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0114 |
|---|
| Symbol | |
|---|
| ID | 4440486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 129553 |
|---|
| End bp | 130272 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639671975 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_813964 |
|---|
| Protein GI | 116628792 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 1.19312e-17 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAC CACTTTATCA GCAAGTGATT TCAGATCTTG AAAAGAAAAT TAAGACTGAA
ATGAAGCCAA ATGATCGACT GCCTAGTGAA AGACAACTTT TAAAAGAATA CGGTGTGAGT
CGAAATACAA TTCGATTAGC ATTAAATAAT TTAGAAGAGC GAGGCATTAT TTATCGATTG
CATGGAAAAG GTACATTTGT TTCCACAATT TATCTAGATC AGACCAACTT AGGAAGTATG
TACTCATTTA GTGAACAGAT GTCAGAAGCA GGACGCAAGC CAACAACACA AAACCGCACA
TTAGAGCTTG TTGTTCCCGA TGCAGCTGTC GCAAATCAGC TTAATTTGAA AGCTGGAGAA
AAAGCGTACA AGTTAGTTAG GTTACGTCTA GCTGATGGAG TACCACTAAT GTATGGAGAA
ACATATTTAC CAGAAAGTAT TTTTCCGGAT CTAAAAATGT CGGATTTAAA TGAAAATCAT
TTGTACACCG TTATGAAGCG AAAATACAAT GAACAAAGTG TTCTTGCCTT TGAAGATGTA
CAAGCGGTTA ATTTAGATAA AAGAGACAGT AAGATTTTAG GCGTAAAGCC CGGGGATGCG
AGTTTAAAAA TTTTTAGACG GGCAATCAAT GATAAAAACG TGCCAATTGA ATTTACCATT
TCTCTAGCTA GAGGAGATAG ATTCATTTAC CGATCACGGC AATATAATCA TTTAGTTTAG
|
|---|
| Protein sequence | MKRPLYQQVI SDLEKKIKTE MKPNDRLPSE RQLLKEYGVS RNTIRLALNN LEERGIIYRL
HGKGTFVSTI YLDQTNLGSM YSFSEQMSEA GRKPTTQNRT LELVVPDAAV ANQLNLKAGE
KAYKLVRLRL ADGVPLMYGE TYLPESIFPD LKMSDLNENH LYTVMKRKYN EQSVLAFEDV
QAVNLDKRDS KILGVKPGDA SLKIFRRAIN DKNVPIEFTI SLARGDRFIY RSRQYNHLV
|
|---|
| |