| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0103 |
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| Symbol | |
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| ID | 4440510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 114928 |
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| End bp | 116277 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639671964 |
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| Product | gamma-aminobutyrate permease related permease |
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| Protein accession | YP_813953 |
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| Protein GI | 116628781 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000103198 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.00000046337 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATGAAA AGGAGAAGCT AAAACTAAAA AGATCGCTTA AGAGCCGTCA TGTAACGATG
ATTGCAATTG GTGGAGCTAT TGGTACTGGA TTGTTTTTAG GATCTGGTAC AGCTATTCAA
AGTGCTGGTC CATCAATAAT CTTGTCATAC CTAATTGTTG GAATTATTAG CTTTTTCATG
ATGAGAGCGT TAGGGGAGCT AATCTTAGCT GAGCCTGATC AACATTCATT TATCGAATCA
GTAAAAAAGT ACCTGGGAAA TAGAATGGAA TTTGTTGCAG GTTGGACTTA TTGGTTATGC
TGGCTTAGTT TAGCAATGGC TGATTTAACT GCAACAGGAA TTTATTTAAA GTATTGGTTT
AAAGACTTAC CACAATGGGT AGGGCCTTTA GTAATCGTTG TTCTGTTAAT GCTTGTTAAC
ATGGTTAACG TTGGATTATT TGGTGAGCTT GAAAGCTGGT TTTCAATGAT TAAGGTGCTG
GCCATCTTAG CTTTAATCGT TACTGGCTTA ATCCTCTTAG TTATGCATAG CAAAATTGAC
TCTAGAACTG TTTCACTGAG TAACTTGATA AATTATGGGG GCTTTTTTCC AACAGGCTCA
TGGGGCTTCT TAAAGTCATT TCAGATGGTA GTCTTTGCCT TTGTTGGGAT AGAAATTGTC
GGTTTAACAG CAGGTGAAAC GGCTAATCCC GATAAAGATA TTCCCAAGGC AATCAATACT
TTACCAGTAA GAATTGGGTT ATTCTATGTT GGTTCTATGA TTGCAATTAT GGCAGTCTAT
CCTTGGAACA AGATTGTTAC TACAACTAGT CCATTTGTGC AGGTTTTTGG CGCAATTGGG
ATTCCTGCAG CAGCTGGAAT TTTAAACTTT GTTGTTTTAA CAGCAGCTAT GTCTGCTACT
AATAGTGCTA TCTTTTCAAC TAGTAGATCA CTATATGCAC TTTCACGTGG AAATAATGCC
CCAAAAAGAT TTGGAAAGTT AAGTAGAAAA GCGGTTCCTA ATAATGCTTT GACCTTTTCA
TCGCTAATTT TATTTATCGT CGTAATTCTA AATTATATTA TGCCAGCACA AGTTTTTGAT
ATTATTTCTA GTGTATCAAC GATCAACTTT ATTATGGTCT GGATAATTAT TATGTGGACG
CATTTGAAAT ATCGTGCAGA AAATAAAGGA AAGCTAGGTA GTTTTAGAAT GCCTGGATTT
CCAATAACTA GCTGGGTTAC AATCATTTTC TACTTAGTGA TTTTAATAAT TTTGGCGCTA
ATTCCAGCCA CAAGGCTGCC GTTACTTATT TCAATTATTT TTATTCTAGC TTTAGCATTG
AGTTACACCC TTTTAGAAAG AAAAAATTAA
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| Protein sequence | MDEKEKLKLK RSLKSRHVTM IAIGGAIGTG LFLGSGTAIQ SAGPSIILSY LIVGIISFFM
MRALGELILA EPDQHSFIES VKKYLGNRME FVAGWTYWLC WLSLAMADLT ATGIYLKYWF
KDLPQWVGPL VIVVLLMLVN MVNVGLFGEL ESWFSMIKVL AILALIVTGL ILLVMHSKID
SRTVSLSNLI NYGGFFPTGS WGFLKSFQMV VFAFVGIEIV GLTAGETANP DKDIPKAINT
LPVRIGLFYV GSMIAIMAVY PWNKIVTTTS PFVQVFGAIG IPAAAGILNF VVLTAAMSAT
NSAIFSTSRS LYALSRGNNA PKRFGKLSRK AVPNNALTFS SLILFIVVIL NYIMPAQVFD
IISSVSTINF IMVWIIIMWT HLKYRAENKG KLGSFRMPGF PITSWVTIIF YLVILIILAL
IPATRLPLLI SIIFILALAL SYTLLERKN
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