| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0090 |
|---|
| Symbol | |
|---|
| ID | 4440497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 103124 |
|---|
| End bp | 103654 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639671951 |
|---|
| Product | methylated DNA-protein cysteine methyltransferase |
|---|
| Protein accession | YP_813940 |
|---|
| Protein GI | 116628768 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0350] Methylated DNA-protein cysteine methyltransferase |
|---|
| TIGRFAM ID | [TIGR00589] O-6-methylguanine DNA methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.0169354 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACTTG CCCAAGCAAA AGTTTTTTAT TACGATTTTG TTGAAATTAA GCCATGGACC
TATGAATTAG TCATTAGTAA CTTGGGATTA GCATTCGTCG GTTCCAAGAA TAGTAATATT
GAATCTTCTA TTTTAGGATT TTATCCTAAC CACATTCTGG TCCAAGATTC CAAAAAATTG
GCTCCTTATG TTCAACAATT AAAAGAATAT TTTGCAGGCA CGCGTCGCTC CTTTACCGTT
CCTATCGACT ACTCAAGCTT TGGTACTCCA TTTCAAAATC AAGTTGTTAA AATGATTGAA
AATATTCCTT ATGGAACAAC CATTTCTTAC AATGATTTAG CTTCTGCTAT TAATGGCTCA
ACTTCGGTTC GAACAGTTGC ACATGCGGTA GCCCTAAATC CATCCCTAAT TTTTATTCCA
AGTCATCGCG TAATTTTAGC GTCAGATAAG GTTGGAAGTT ATAGAATGGG AGAGAAAGAA
AAGCAACGCT TAATAAAACT TGAAGAAGGC TATTTGAATG CAATTGATTA A
|
|---|
| Protein sequence | MPLAQAKVFY YDFVEIKPWT YELVISNLGL AFVGSKNSNI ESSILGFYPN HILVQDSKKL
APYVQQLKEY FAGTRRSFTV PIDYSSFGTP FQNQVVKMIE NIPYGTTISY NDLASAINGS
TSVRTVAHAV ALNPSLIFIP SHRVILASDK VGSYRMGEKE KQRLIKLEEG YLNAID
|
|---|
| |