Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0089 |
Symbol | |
ID | 4440496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 102355 |
End bp | 103137 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639671950 |
Product | hypothetical protein |
Protein accession | YP_813939 |
Protein GI | 116628767 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.0183454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTGA TTAAACTTTA TCAACCCTTT TTTGACGCTA ATAACTGGGC TCATGTCCTA ACTAGCGGAC AAGATTGGAT GATGATTCTG ACTCTAATTT TAATGGAGTG TTTGCTATCA GTTGATAATG CGGTGGTTTT AGCCGCACAA ACGCAAGTTT TACCAACTAA AGATGAGCAA AGGAAATCGT TAGTTTACGG ACTTTGGGGG GCTTATCTAT TTCGCTTTAT TGTAATTGGG ATTGGTACTT ACCTAATTAA TTTCTGGGAA ATCAAACTGT TAGGCGGTTT ATATTTACTT TACTTAGTTT ATAAGTATTT TTATGATCTT CGCCACCCTG CACAAGTTGC TAAGAAAGAA GCGGCAAAAA AAGAAGCCCA TAAGAAAAAG AGCTCCAAGA CAAGAAAGCA CCATCTTTCA TTATTTTGGA GAACTGTTAT TTCAATTGAG TCAATGGATA TCGTCTTTTC AATTGACTCT GTTTTAGCAG CCTTAGCCAT GTCAAATAAT CCAGTTGTCG TCTTAGTTGG CGGAATGATT GGTATTCTAT GCATGCGAGG AGTTGCTGAA GTTATTATCA AATTAATGGA AATTATTCCT GAACTTCAAA CAATGGCCTA TGTTTTAATC ACAATCATTG CAGTTAAGCT ACTTGTTTCA TTGCCACCGC TAAACTTCAA ACTGCCCGAT GCCATCTTTG CCGGCATCGT TTTTGGTACA GTTATTTTAA CAATTATTTT TCATTACGTT CGACAAAACT TGCATGGCAA AAAAATGCCT TAA
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Protein sequence | MQLIKLYQPF FDANNWAHVL TSGQDWMMIL TLILMECLLS VDNAVVLAAQ TQVLPTKDEQ RKSLVYGLWG AYLFRFIVIG IGTYLINFWE IKLLGGLYLL YLVYKYFYDL RHPAQVAKKE AAKKEAHKKK SSKTRKHHLS LFWRTVISIE SMDIVFSIDS VLAALAMSNN PVVVLVGGMI GILCMRGVAE VIIKLMEIIP ELQTMAYVLI TIIAVKLLVS LPPLNFKLPD AIFAGIVFGT VILTIIFHYV RQNLHGKKMP
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