Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0082 |
Symbol | |
ID | 4440438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 95751 |
End bp | 96869 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639671943 |
Product | endoglucanase Y |
Protein accession | YP_813932 |
Protein GI | 116628760 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3405] Endoglucanase Y |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000532728 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 0.916342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAA AGAATTTAAT ACTGATTTTA GGAACTATCA TTGCTTATTT AGGAATCATC GCCTATGTGA GGATGAGCAA TGATCGAACG CTAGAAGAGC GATGTTATCA TTCGTGGCGT GAAGATTATA TAAAAAATAA AAATCAAAAT GAGCAATATG TGAATGCAGC AGGAAGAAAT AATCCTTCAT TTGCCTTATC TGAAGCACAA GGTTATGGAA TGTTACTGGC TGCTAAAGCG GGAGAGAAAC ATTTAGGAAG TCGGATTGAT TTTCAAAAAC TAGATAATTA TTACCTGGCT CATCGCTTAA CAAATTCAAA TTTGATGAGC TGGAAACAGA AAGATAGAAA AAATATTTGG CGTGATAATC CTGTGAGTGC AAGTGATGGT GACATAATAA TTGCGCAAGC TTTGCTGCAT GCTGATAGAG TTTGGCCAGG ACATGGTTAT AAGTCACAAG CTGTTAACTT AATTAATGAT ATTAAAAGGC TTGAAATCAA TCAGAAAGCT AAAATGGTAA CTGTCGGAAA CTGGGCTAAT AAAGATTCAC GCTTTTATAA TGTACTGAGA ACATCAGATG TAATGCCAAA AGCGTTTGAA GAATTTTATC AAGTAACTGG GGATCAAGCT TGGCTAACAA TTAAAAGAAA AATGCTTAAC TATTTGCAAA AGTTAAGCAA GAAGTACAAT ACTGGTTTAG TTCCTGATTT TGCCTGGATT TCTAATAATT ATGTTAGGCC CGCACAAGCT AATGAAGTGG CGATTAATGA TGATGGTCAC TACAGTGCAA ATGCTTGCCG AGTCCCAATG TTGTTAGCTG AAAGCAATGA TAAAGAAGCA GCTCAAGTAG TAAAGAAGAT GCTAAAATTT TTTAAGAAAA AAGGGACTTC AGCTGGTTTT ACCTTAAAAG GTGAAAAATT ACATCATTAT CAATCAGCGA GCTTTAGTGC GCCAATCTTT GTAGCGGCTA GTAAGTATCG TAATCAGGGT TATGATACTT TGATTGAACA AGAAAAATAT ATCTTTTCAA GACCACTTCC GAAAGATAAC TATTACGATG CTACTTTAAC GGTTTTAGCT GCTTTAAATA CAAATGAGTT GACGGGATTA GAAAAATAG
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Protein sequence | MKVKNLILIL GTIIAYLGII AYVRMSNDRT LEERCYHSWR EDYIKNKNQN EQYVNAAGRN NPSFALSEAQ GYGMLLAAKA GEKHLGSRID FQKLDNYYLA HRLTNSNLMS WKQKDRKNIW RDNPVSASDG DIIIAQALLH ADRVWPGHGY KSQAVNLIND IKRLEINQKA KMVTVGNWAN KDSRFYNVLR TSDVMPKAFE EFYQVTGDQA WLTIKRKMLN YLQKLSKKYN TGLVPDFAWI SNNYVRPAQA NEVAINDDGH YSANACRVPM LLAESNDKEA AQVVKKMLKF FKKKGTSAGF TLKGEKLHHY QSASFSAPIF VAASKYRNQG YDTLIEQEKY IFSRPLPKDN YYDATLTVLA ALNTNELTGL EK
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