Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0035 |
Symbol | |
ID | 4440424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 33548 |
End bp | 36397 |
Gene Length | 2850 bp |
Protein Length | 949 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639671897 |
Product | superfamily II DNA/RNA helicase |
Protein accession | YP_813888 |
Protein GI | 116628716 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0259774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 90 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTGA AAGCTGTGGA TAACGTTTTA AAAGATGCAA TTTTGAATGG CTTATACAAT AAGAATGAGA ATAAGGGAAA TGAGTTTATT AGTCCTCAAT TAGTAAATAA TGATGATCAA AGTAAAATTT GGTTTACTTT GCGACAAGAA TTAATGTCAT GTACCTCTTT TACCTGGGCA GTTGCTTTTA TTTCAGAGAA TATGCTCGTT CCCTTTAAGT TAGTAATGTC GGAATTAGCG AAAAAAGGAG TTAACGGTAC CTTAATTACA GGAACTTATC TTGGCTTTAA TAGTCCTAAA GTTTTTAAGG AATTAGTGAA GATTCCTAAT TTAGAGGTAC GATTAAGTGA GGAAGCTGGT TTTCATGCAA AAGGTTATAT TTTTAATCAT GAAGACTATC AGACGATTTT AATTGGAAGT GCAAATTTTA CTAGAAGTGC CTTATTAAAA AATTGCGAGT GGGGACTAAA GGTAACCTCG CATGAAAACG GTCAGCTAGT AGCAGAAGTT AACGATCAAA TTGAAAATAA TTTAAGTAAT AGTTTGATAC TTACTAGTTC TTGGATTAAA GAATATGAAC AAAATTGGCA GCCAGTCAAA AAAGCGGCTT ACCTTCCATT AGGGAAAGCC AAGAAAATAT TGCCTAACCA AATGCAAAAA GCAGCTTTAG CGAATTTAAA TGCTTTAGTA AAAGAACAAG CCAAAAAAGC GCTAGTCGTC TCAGCGACAG GGACTGGAAA AACATATTTG GGTGCTTTTG CAGTTAAGGA ATATAAGCCA AAAAAGTTTC TGTATCTAGT TCACCGAGAA CAAATAGCTA AGAAAGCTTT AGAGAGTTTT TACCGAGTAA TTGGTGGCAA GAAAAGCGAC TATGGTTTAT TAACTGGAAA TAAACATGAT TTTGATAAAA AGTATCTTTT TGGAACGGTT CAAACTGTAA GTCAGGAACA AATACTCGAA CAATTAGATC CGGAAGAGTT TGACTATATT TTAATTGATG AAGCTCATCG AGTGGCAGCT CCAACTTATC AGAAGATTTT GAATCATTTT GCACCGAAAT TCTTATTAGG TATGACGGCA ACGCCCGAGA GAATGGATAA GCAAAATATT TATGAAATAT TTGATTATCA TTTAGCTTAT GAAATTAGAC TAAAGGATGC CTTAAATGAC CAAATGCTTA CACCGTTTCA TTATGTGGGC GTTGAAGATT ATACAGTGGG AAACCATGTA ATTAGTGAAA CAAGTAAGTT AAAAGATCTA GTCGCTAGAA AGCGAGTAGA GTATGTACTT AAACAGCTTG ATTACTACGG CTATTGCGGA GAGAAAGCAA AGGGCTTAGT ATTTTGCAGT CGGCAAGAAG AAGCAAGAGA GCTAGCAAAA TTATTTAGTC AGACAGGGCA TCCGTCTCGT GCGCTTACTA ATGAGGACAG TCAAAAACAG CGTATTGAAG TAACTCATCA GTTAGAAAAT GGTGAATTAG AATACATTTT TACCGTTGAT TTATTTAATG AAGGAATTGA TATTCCATCG CTTAATCAAA TTGTGATGTT ACGAAATACC CAATCAAGTA TTGTTTTTAT TCAGCAATTG GGTCGAGGCC TTCGTAAATT TCCGGGAAAA GATTATGTCA CGGTGATTGA TTTCCTGGGA AATTATAAAA ACAATTATCT AATTCCGATT GCTTTAAATG GTGATAAGAG TCGTGACAAA GATCAAGCAG TTAGAGAAAG CAAGTTACCA CAAGTAATTG ATGTTTCAAC GATTAACTTT ACAGAGATTG CTTCTCAGAG AATTTTGGTT TCTCTTGAAA AGATAAAGCT AGACAGTATG CGCGAACTAA GGCAGTCGTA TAAAGACTTG AAAGAAAAGA TTGGTCGTGT TCCACTCTTA TACGATTTTT ATCAATATGG TACGACTGCG CCAACGGTTT TTGCTAAAAA TCATGCTCTA GCTCATTATG GTGACTTTTT AAAGAAGATG GGAGAAGAAG TAAATTTAGG TAATTATCAA AATGCAGCTC TCTCTTTTGT GACGAAGGAG TTATTATTTG GAAAGAGACC GCATGAGTTG CTACTCTTAG AAAGTTGTTT AGATAAAAAC ATCAGTAGAG CTGATTTTAC TAAATTGCTT AAGAGCAAAA ATTGTTATAT TAGCGAAGAT GTACTTAATT CGGTTGAAAA AATTCTATCA TTAAATTTTT TTGACGTTAA ACAGGGAAAA ACAACCAAGA AAGAGCAATA CGGAAGTTAT CCATTAATTG AAAAAGAAAA TGGAGAGTAT CGCTTGTCTA GTCAACTACT TCAGGCATTA AATGATAACC ACCAATTTAA AATGCTATTT GAAGATGTCC TAAAAACAGG TTTAGCCCTT GCTCGGGAAT ATAATTCGCA AGCGCAATTT ACTCTGTATA AGCAATATGA TCGTAAAGAT GTTTGTCGTC TGCTAAATTG GCCTAAGGAT GTTTCGGCTC CAATGTATGG GTATCGCGTG GGAGAAAAAG AAACACCGAT TTTTATCACT TATCAAAAAG ATTCTGAGAA AAAACGTAAT GCTCGCTATC AAAATACGCT TGAAAATGGT CATAGTTTAC GGTGGTATAC TCGTACGCCG CGTCACTTAG ATTCAGATGA AGTAAAACGA TTGCTTCATA ATAAAAATAT GAAATTGCAC TTATTTGTGA AACGAAGTGA TGCAGCAGGA AAAGAATTTT ATTATTTAGG GACAGCTGAG ATCCAGAAAG ACTCAGTCAA AGAAGAAAAA ATTGGACTTA AGCAAAAGTG TGCAGTTGGC ATGAATTTGG TCCTTAATCA TCCTTTAAAG CAATCGATTT ATAATTTGCT TTTTAGTTAA
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Protein sequence | MEVKAVDNVL KDAILNGLYN KNENKGNEFI SPQLVNNDDQ SKIWFTLRQE LMSCTSFTWA VAFISENMLV PFKLVMSELA KKGVNGTLIT GTYLGFNSPK VFKELVKIPN LEVRLSEEAG FHAKGYIFNH EDYQTILIGS ANFTRSALLK NCEWGLKVTS HENGQLVAEV NDQIENNLSN SLILTSSWIK EYEQNWQPVK KAAYLPLGKA KKILPNQMQK AALANLNALV KEQAKKALVV SATGTGKTYL GAFAVKEYKP KKFLYLVHRE QIAKKALESF YRVIGGKKSD YGLLTGNKHD FDKKYLFGTV QTVSQEQILE QLDPEEFDYI LIDEAHRVAA PTYQKILNHF APKFLLGMTA TPERMDKQNI YEIFDYHLAY EIRLKDALND QMLTPFHYVG VEDYTVGNHV ISETSKLKDL VARKRVEYVL KQLDYYGYCG EKAKGLVFCS RQEEARELAK LFSQTGHPSR ALTNEDSQKQ RIEVTHQLEN GELEYIFTVD LFNEGIDIPS LNQIVMLRNT QSSIVFIQQL GRGLRKFPGK DYVTVIDFLG NYKNNYLIPI ALNGDKSRDK DQAVRESKLP QVIDVSTINF TEIASQRILV SLEKIKLDSM RELRQSYKDL KEKIGRVPLL YDFYQYGTTA PTVFAKNHAL AHYGDFLKKM GEEVNLGNYQ NAALSFVTKE LLFGKRPHEL LLLESCLDKN ISRADFTKLL KSKNCYISED VLNSVEKILS LNFFDVKQGK TTKKEQYGSY PLIEKENGEY RLSSQLLQAL NDNHQFKMLF EDVLKTGLAL AREYNSQAQF TLYKQYDRKD VCRLLNWPKD VSAPMYGYRV GEKETPIFIT YQKDSEKKRN ARYQNTLENG HSLRWYTRTP RHLDSDEVKR LLHNKNMKLH LFVKRSDAAG KEFYYLGTAE IQKDSVKEEK IGLKQKCAVG MNLVLNHPLK QSIYNLLFS
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