Gene LGAS_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0035 
Symbol 
ID4440424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp33548 
End bp36397 
Gene Length2850 bp 
Protein Length949 aa 
Translation table11 
GC content35% 
IMG OID639671897 
Productsuperfamily II DNA/RNA helicase 
Protein accessionYP_813888 
Protein GI116628716 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0259774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTGA AAGCTGTGGA TAACGTTTTA AAAGATGCAA TTTTGAATGG CTTATACAAT 
AAGAATGAGA ATAAGGGAAA TGAGTTTATT AGTCCTCAAT TAGTAAATAA TGATGATCAA
AGTAAAATTT GGTTTACTTT GCGACAAGAA TTAATGTCAT GTACCTCTTT TACCTGGGCA
GTTGCTTTTA TTTCAGAGAA TATGCTCGTT CCCTTTAAGT TAGTAATGTC GGAATTAGCG
AAAAAAGGAG TTAACGGTAC CTTAATTACA GGAACTTATC TTGGCTTTAA TAGTCCTAAA
GTTTTTAAGG AATTAGTGAA GATTCCTAAT TTAGAGGTAC GATTAAGTGA GGAAGCTGGT
TTTCATGCAA AAGGTTATAT TTTTAATCAT GAAGACTATC AGACGATTTT AATTGGAAGT
GCAAATTTTA CTAGAAGTGC CTTATTAAAA AATTGCGAGT GGGGACTAAA GGTAACCTCG
CATGAAAACG GTCAGCTAGT AGCAGAAGTT AACGATCAAA TTGAAAATAA TTTAAGTAAT
AGTTTGATAC TTACTAGTTC TTGGATTAAA GAATATGAAC AAAATTGGCA GCCAGTCAAA
AAAGCGGCTT ACCTTCCATT AGGGAAAGCC AAGAAAATAT TGCCTAACCA AATGCAAAAA
GCAGCTTTAG CGAATTTAAA TGCTTTAGTA AAAGAACAAG CCAAAAAAGC GCTAGTCGTC
TCAGCGACAG GGACTGGAAA AACATATTTG GGTGCTTTTG CAGTTAAGGA ATATAAGCCA
AAAAAGTTTC TGTATCTAGT TCACCGAGAA CAAATAGCTA AGAAAGCTTT AGAGAGTTTT
TACCGAGTAA TTGGTGGCAA GAAAAGCGAC TATGGTTTAT TAACTGGAAA TAAACATGAT
TTTGATAAAA AGTATCTTTT TGGAACGGTT CAAACTGTAA GTCAGGAACA AATACTCGAA
CAATTAGATC CGGAAGAGTT TGACTATATT TTAATTGATG AAGCTCATCG AGTGGCAGCT
CCAACTTATC AGAAGATTTT GAATCATTTT GCACCGAAAT TCTTATTAGG TATGACGGCA
ACGCCCGAGA GAATGGATAA GCAAAATATT TATGAAATAT TTGATTATCA TTTAGCTTAT
GAAATTAGAC TAAAGGATGC CTTAAATGAC CAAATGCTTA CACCGTTTCA TTATGTGGGC
GTTGAAGATT ATACAGTGGG AAACCATGTA ATTAGTGAAA CAAGTAAGTT AAAAGATCTA
GTCGCTAGAA AGCGAGTAGA GTATGTACTT AAACAGCTTG ATTACTACGG CTATTGCGGA
GAGAAAGCAA AGGGCTTAGT ATTTTGCAGT CGGCAAGAAG AAGCAAGAGA GCTAGCAAAA
TTATTTAGTC AGACAGGGCA TCCGTCTCGT GCGCTTACTA ATGAGGACAG TCAAAAACAG
CGTATTGAAG TAACTCATCA GTTAGAAAAT GGTGAATTAG AATACATTTT TACCGTTGAT
TTATTTAATG AAGGAATTGA TATTCCATCG CTTAATCAAA TTGTGATGTT ACGAAATACC
CAATCAAGTA TTGTTTTTAT TCAGCAATTG GGTCGAGGCC TTCGTAAATT TCCGGGAAAA
GATTATGTCA CGGTGATTGA TTTCCTGGGA AATTATAAAA ACAATTATCT AATTCCGATT
GCTTTAAATG GTGATAAGAG TCGTGACAAA GATCAAGCAG TTAGAGAAAG CAAGTTACCA
CAAGTAATTG ATGTTTCAAC GATTAACTTT ACAGAGATTG CTTCTCAGAG AATTTTGGTT
TCTCTTGAAA AGATAAAGCT AGACAGTATG CGCGAACTAA GGCAGTCGTA TAAAGACTTG
AAAGAAAAGA TTGGTCGTGT TCCACTCTTA TACGATTTTT ATCAATATGG TACGACTGCG
CCAACGGTTT TTGCTAAAAA TCATGCTCTA GCTCATTATG GTGACTTTTT AAAGAAGATG
GGAGAAGAAG TAAATTTAGG TAATTATCAA AATGCAGCTC TCTCTTTTGT GACGAAGGAG
TTATTATTTG GAAAGAGACC GCATGAGTTG CTACTCTTAG AAAGTTGTTT AGATAAAAAC
ATCAGTAGAG CTGATTTTAC TAAATTGCTT AAGAGCAAAA ATTGTTATAT TAGCGAAGAT
GTACTTAATT CGGTTGAAAA AATTCTATCA TTAAATTTTT TTGACGTTAA ACAGGGAAAA
ACAACCAAGA AAGAGCAATA CGGAAGTTAT CCATTAATTG AAAAAGAAAA TGGAGAGTAT
CGCTTGTCTA GTCAACTACT TCAGGCATTA AATGATAACC ACCAATTTAA AATGCTATTT
GAAGATGTCC TAAAAACAGG TTTAGCCCTT GCTCGGGAAT ATAATTCGCA AGCGCAATTT
ACTCTGTATA AGCAATATGA TCGTAAAGAT GTTTGTCGTC TGCTAAATTG GCCTAAGGAT
GTTTCGGCTC CAATGTATGG GTATCGCGTG GGAGAAAAAG AAACACCGAT TTTTATCACT
TATCAAAAAG ATTCTGAGAA AAAACGTAAT GCTCGCTATC AAAATACGCT TGAAAATGGT
CATAGTTTAC GGTGGTATAC TCGTACGCCG CGTCACTTAG ATTCAGATGA AGTAAAACGA
TTGCTTCATA ATAAAAATAT GAAATTGCAC TTATTTGTGA AACGAAGTGA TGCAGCAGGA
AAAGAATTTT ATTATTTAGG GACAGCTGAG ATCCAGAAAG ACTCAGTCAA AGAAGAAAAA
ATTGGACTTA AGCAAAAGTG TGCAGTTGGC ATGAATTTGG TCCTTAATCA TCCTTTAAAG
CAATCGATTT ATAATTTGCT TTTTAGTTAA
 
Protein sequence
MEVKAVDNVL KDAILNGLYN KNENKGNEFI SPQLVNNDDQ SKIWFTLRQE LMSCTSFTWA 
VAFISENMLV PFKLVMSELA KKGVNGTLIT GTYLGFNSPK VFKELVKIPN LEVRLSEEAG
FHAKGYIFNH EDYQTILIGS ANFTRSALLK NCEWGLKVTS HENGQLVAEV NDQIENNLSN
SLILTSSWIK EYEQNWQPVK KAAYLPLGKA KKILPNQMQK AALANLNALV KEQAKKALVV
SATGTGKTYL GAFAVKEYKP KKFLYLVHRE QIAKKALESF YRVIGGKKSD YGLLTGNKHD
FDKKYLFGTV QTVSQEQILE QLDPEEFDYI LIDEAHRVAA PTYQKILNHF APKFLLGMTA
TPERMDKQNI YEIFDYHLAY EIRLKDALND QMLTPFHYVG VEDYTVGNHV ISETSKLKDL
VARKRVEYVL KQLDYYGYCG EKAKGLVFCS RQEEARELAK LFSQTGHPSR ALTNEDSQKQ
RIEVTHQLEN GELEYIFTVD LFNEGIDIPS LNQIVMLRNT QSSIVFIQQL GRGLRKFPGK
DYVTVIDFLG NYKNNYLIPI ALNGDKSRDK DQAVRESKLP QVIDVSTINF TEIASQRILV
SLEKIKLDSM RELRQSYKDL KEKIGRVPLL YDFYQYGTTA PTVFAKNHAL AHYGDFLKKM
GEEVNLGNYQ NAALSFVTKE LLFGKRPHEL LLLESCLDKN ISRADFTKLL KSKNCYISED
VLNSVEKILS LNFFDVKQGK TTKKEQYGSY PLIEKENGEY RLSSQLLQAL NDNHQFKMLF
EDVLKTGLAL AREYNSQAQF TLYKQYDRKD VCRLLNWPKD VSAPMYGYRV GEKETPIFIT
YQKDSEKKRN ARYQNTLENG HSLRWYTRTP RHLDSDEVKR LLHNKNMKLH LFVKRSDAAG
KEFYYLGTAE IQKDSVKEEK IGLKQKCAVG MNLVLNHPLK QSIYNLLFS