Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0025 |
Symbol | |
ID | 4440414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 25106 |
End bp | 25753 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639671887 |
Product | putative NADH-flavin reductase |
Protein accession | YP_813878 |
Protein GI | 116628706 |
COG category | [R] General function prediction only |
COG ID | [COG2910] Putative NADH-flavin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0898967 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAG GTATTATTGG TGCTTCAGGC ATGGCAGGAA GTGCAATTTA TAAGTTAGCT AGTCAAAATA AGGACTTAGA GGTAACTGGA ATTGTTAGAG ATGAAGATAA GGCTAAAAGA GTCTTAGGTA AGGATGCTAA ACTCTTAATT GGTGACGTTT TAACAATGGA TGACAGTTTA CTCCAACAAT TTAATGTGAT TGTTGACGCC TTTGGGACTA AGCCTGAAAA AGCAAGAGAT CAGGTAAAGC TTGCTACTAA GTTATGCGGT CTAGCTAAGA ATAAAGATAT TAGAGTAATT TTTATTTTAG GTGCTGGCAG TCTTAGAACT GGAATTGATA ATCACTTAGT CGTTGAAGAT ATTAAGAAAT TAACAGGCTC TGAAAACTGG ATTAATACAC CAAAAGAACA GTTGAATGAG TTGAATTATT TAAAGCAAGT CGAAGATGTA GATTGGCTCG GAATTTCACC AGCCTTAACC TTTGAAGCAG GTCCAGAAGC TGCGGGGTAT ATGTTAGGTA ATGATACTTT GCTCTACAAC AATAACAATG AATCTAAAGT AACTTCGGGC ACAATGGCAC GCTTAGTTGT AAATGAGATT GTTCACCCAG AACACCATAA AGAAAGAATT ACTTTAGTCG ATGAATAA
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Protein sequence | MKVGIIGASG MAGSAIYKLA SQNKDLEVTG IVRDEDKAKR VLGKDAKLLI GDVLTMDDSL LQQFNVIVDA FGTKPEKARD QVKLATKLCG LAKNKDIRVI FILGAGSLRT GIDNHLVVED IKKLTGSENW INTPKEQLNE LNYLKQVEDV DWLGISPALT FEAGPEAAGY MLGNDTLLYN NNNESKVTSG TMARLVVNEI VHPEHHKERI TLVDE
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