Gene LGAS_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0025 
Symbol 
ID4440414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp25106 
End bp25753 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content36% 
IMG OID639671887 
Productputative NADH-flavin reductase 
Protein accessionYP_813878 
Protein GI116628706 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0898967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAG GTATTATTGG TGCTTCAGGC ATGGCAGGAA GTGCAATTTA TAAGTTAGCT 
AGTCAAAATA AGGACTTAGA GGTAACTGGA ATTGTTAGAG ATGAAGATAA GGCTAAAAGA
GTCTTAGGTA AGGATGCTAA ACTCTTAATT GGTGACGTTT TAACAATGGA TGACAGTTTA
CTCCAACAAT TTAATGTGAT TGTTGACGCC TTTGGGACTA AGCCTGAAAA AGCAAGAGAT
CAGGTAAAGC TTGCTACTAA GTTATGCGGT CTAGCTAAGA ATAAAGATAT TAGAGTAATT
TTTATTTTAG GTGCTGGCAG TCTTAGAACT GGAATTGATA ATCACTTAGT CGTTGAAGAT
ATTAAGAAAT TAACAGGCTC TGAAAACTGG ATTAATACAC CAAAAGAACA GTTGAATGAG
TTGAATTATT TAAAGCAAGT CGAAGATGTA GATTGGCTCG GAATTTCACC AGCCTTAACC
TTTGAAGCAG GTCCAGAAGC TGCGGGGTAT ATGTTAGGTA ATGATACTTT GCTCTACAAC
AATAACAATG AATCTAAAGT AACTTCGGGC ACAATGGCAC GCTTAGTTGT AAATGAGATT
GTTCACCCAG AACACCATAA AGAAAGAATT ACTTTAGTCG ATGAATAA
 
Protein sequence
MKVGIIGASG MAGSAIYKLA SQNKDLEVTG IVRDEDKAKR VLGKDAKLLI GDVLTMDDSL 
LQQFNVIVDA FGTKPEKARD QVKLATKLCG LAKNKDIRVI FILGAGSLRT GIDNHLVVED
IKKLTGSENW INTPKEQLNE LNYLKQVEDV DWLGISPALT FEAGPEAAGY MLGNDTLLYN
NNNESKVTSG TMARLVVNEI VHPEHHKERI TLVDE