| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0012 |
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| Symbol | rplI |
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| ID | 4438897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 13266 |
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| End bp | 13730 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639671874 |
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| Product | 50S ribosomal protein L9 |
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| Protein accession | YP_813867 |
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| Protein GI | 116628695 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0359] Ribosomal protein L9 |
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| TIGRFAM ID | [TIGR00158] ribosomal protein L9 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.181348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0000209307 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGAAATTCA TGAAGGTTAT TTTTATTAAA GACATGAAGG GTAAAGGTAA GCGTGGAGAA
GTTAAGAACG TACCCGATGG CTACGCTCAG AATTTTTTGA TTAAAAATGG TTATGCAAAA
GAAGCTACTA GCTCCAACTT AAATACCTTA AAACGTGTTC AAAAGGCAGA AAAAGATGCT
TACGAAGCAG AAAAAGCAGC AGCTGAGGAT ATTAAGAAAA AACTTGAAGA TGACAAGACT
ATCGTAAACT TTAAGTCTAA AGCTGGCACT GACTCTCGTT TATTCGGCTC TATTTCAAGT
AAGAAGATTG TTGAAGGACT TGAAAAGCAA TATGGTATTA AAGTCGACAA GCGTAAATTG
GAGCTTCCAG AGCCAATTAA ATCTTTAGGA TACACAAATG TACCTGTTAA GCTATTTAAA
GGCGTAGAAG CAGTAATTCG CGTTCACATT ACGGAGCAAG ACTAA
|
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| Protein sequence | MKFMKVIFIK DMKGKGKRGE VKNVPDGYAQ NFLIKNGYAK EATSSNLNTL KRVQKAEKDA
YEAEKAAAED IKKKLEDDKT IVNFKSKAGT DSRLFGSISS KKIVEGLEKQ YGIKVDKRKL
ELPEPIKSLG YTNVPVKLFK GVEAVIRVHI TEQD
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