Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0006 |
Symbol | |
ID | 4438891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 6345 |
End bp | 8834 |
Gene Length | 2490 bp |
Protein Length | 829 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639671868 |
Product | DNA gyrase, A subunit |
Protein accession | YP_813861 |
Protein GI | 116628689 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000708877 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 8.0391e-18 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTAACG AAAATCAACC TCAAGATCAC AGAATACGTA ATGTTGATTT GACCCATACG ATGCGTAGCT CTTTCTTAGA TTATGCTATG TCAGTTATTG TGGCTCGTGC CTTACCTGAC GTTCGGGATG GTCTAAAGCC TGTACAACGT CGTATTCTTT ACGGAATGCA TGAACTAGGA GTTACACCAG ATAAACAGTA CAAAAAGAGT GCCAGAATTG TTGGAGAAGT TATGGGTAAG TTTCACCCAC ATGGTGACTC CTCAATTTAC TTAGCTATGG CTCACATGGC TCAAGACTTT TCATATCGTT ATATGCTAGT TGATGGACAC GGAAACTTTG GTTCTGTCGA TGGGGATGAA CCAGCCGCAA TGCGTTATAC CGAGGCAAAA ATGAGCAAAA TTGCGGTTGA AATGCTTCGC GATATCAATA AAGAAACGAT TGACTGGCAA CGTAACTATG ATGATACGGA AAATGAGCCG GTAGTTTTAC CTGCCAGAAT TCCTAACTTA CTTGTAAATG GTGCTAGCGG TATTGCTGTT GGTATGACGA CTAATATTCC ACCACATAAT TTGGCGGAAG TAATTAGTGG GATCCATATG TTGATGGATA ATCCAGATGT TACTACCAAA GACTTAATGA AGGTCATTCC TGGTCCTGAT TTTCCAACTG GCGGTATTGT AATGGGACGT GGCGGCATTT ACCGCGCATA TGAAACAGGT AAAGGTAATA TCGTTGTTCG TGCAAAGACT AATATCGAAA CAGAAAAGAA TGGCCGTGAA CGAATCGTAG TTAGTGAATT ACCATACTTA GTAAATAAGG CTGAATTAGT TAAGAAAATT GCAGATTTAG CTCGTGAAAA AATAATTGAT GGTATTACTG GAGTTCGTGA TGAATCAGAC CAGACTGGTA TGAGAATTAC GATTGATATT CGCCGGGATG CAAGTGCTAG CGTGGTTTTG AATAACTTAT TTAAAGAAAC CCAAATGCAG GCAAACTTCG GTATGAATAT GGTTGCGATT GTTAACGGCG CTCCACACTT CTTAACTTTG AAGCAAATGC TTGAATACTA TCTTCACCAT CAAGAAGATG TTATTACTCG CAGAACTAAG TTTGAATTAA AGAAGGCTGA AGCTAGAGCA CATATTTTAG CTGGATTGAG AATTGCGCTA GATCATATTG ATGAAATCAT TAAGATTATT CGTGGATCCC AAAATAGCGA TATTGCTAAA GCACAATTGA TTCAAAACTT TGGCTTAGAT GATCGTCAAT CTCAAGCTAT TTTGGATATG CGTCTGGTTC GTTTAACAGG TTTAGAGCGA GACAAGATTG AAGCTGAATA TCAAGATTTA CAAGCAAAAA TTGCAGATTA CAAAGATATT CTCGCTAAGC CAGAACGAAT CGATGAAATT ATCTACAATG AATTGCTTGA TATTCAAAAG CGTTTTGGTG ATGATAGACG AACTAAGATT GCGGAAGGCG AAGCAGTTTC AATTGAAGAT GAAGATTTAA TTGAACAAAA AGATGTATTG CTAACTCTCA CTCACAATGG CTACATTAAG CGGATGCCAG CTGATGAATT TAAAGTACAA AACCGTGGTG GACGCGGAAT AAAGGGAATG GGAGTACAAG ATGATGACTT TATCAATCAC TTGATCTTCT CAAGTACCCA TGACTTTTTG TTATTCTTTA CTAACTTAGG TAAGGTTTAC TCAAAGAAGG CTTATGAAAT TCCAGAATTT GGTAGAAACG CTAAAGGATT GCCAATCGTT AACTTGCTAG AGCTCGATAA GGGTGAAAAG ATTCAAGCGG TAATTAATGT TCCGGAAGGC GCAGATGATA ACTATCTCTT CTTTGTTACT AAGATGGGAA CAGTCAAGAG AACAAAAGTT AGTGAATTTC AAAATATCCG TCGTAGTGGT TTGATTGCCT TGACTCTTCG CGATGGGGAT GAGTTAAATA ACGTTTTAAC TACTGATGGT AAGCAAAATA TCCTTATTGG AACTCATTTA GGCTATGCGG TTACCTTTAA TGAAAATGAT GTTCGCTCAA TGGGTAGAAC TGCAGCAGGT GTACGCGGAA TTAATCTAAG AGACAACGAT TACGTAGTCG GATCTGATAT TTTAGAACCT GATTCAGAAG TATTAGTAAT TTCTGAAAAA GGATACGGAA AGCGGACCGC AGCTTCTGAA TATCCAGTTA AGGGACGTGG TGGTAAAGGA ATTAAAACTG CCAACATTAC TGAAAAGAAT GGTCCTTTAG CAGGTGTAAC AGTAGTTAAT GGTGATGAAG ATATCATGTT AATCACTAGT GCTGGCGTTA TGATTCGTTT TGACGTTGAT GACGTTTCTC AAACTGGTCG AGCTACTTTA GGTGTACGTT TAATCAAGGT TGATGATGGT GCTCAAGTTG CAAGTATTAC TGCAGTACCG AAGGCTAATG ATGAAGACGA AGAAGCAACT GATGAAAAAG AACCAGTAGA AGAAAATTAA
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Protein sequence | MANENQPQDH RIRNVDLTHT MRSSFLDYAM SVIVARALPD VRDGLKPVQR RILYGMHELG VTPDKQYKKS ARIVGEVMGK FHPHGDSSIY LAMAHMAQDF SYRYMLVDGH GNFGSVDGDE PAAMRYTEAK MSKIAVEMLR DINKETIDWQ RNYDDTENEP VVLPARIPNL LVNGASGIAV GMTTNIPPHN LAEVISGIHM LMDNPDVTTK DLMKVIPGPD FPTGGIVMGR GGIYRAYETG KGNIVVRAKT NIETEKNGRE RIVVSELPYL VNKAELVKKI ADLAREKIID GITGVRDESD QTGMRITIDI RRDASASVVL NNLFKETQMQ ANFGMNMVAI VNGAPHFLTL KQMLEYYLHH QEDVITRRTK FELKKAEARA HILAGLRIAL DHIDEIIKII RGSQNSDIAK AQLIQNFGLD DRQSQAILDM RLVRLTGLER DKIEAEYQDL QAKIADYKDI LAKPERIDEI IYNELLDIQK RFGDDRRTKI AEGEAVSIED EDLIEQKDVL LTLTHNGYIK RMPADEFKVQ NRGGRGIKGM GVQDDDFINH LIFSSTHDFL LFFTNLGKVY SKKAYEIPEF GRNAKGLPIV NLLELDKGEK IQAVINVPEG ADDNYLFFVT KMGTVKRTKV SEFQNIRRSG LIALTLRDGD ELNNVLTTDG KQNILIGTHL GYAVTFNEND VRSMGRTAAG VRGINLRDND YVVGSDILEP DSEVLVISEK GYGKRTAASE YPVKGRGGKG IKTANITEKN GPLAGVTVVN GDEDIMLITS AGVMIRFDVD DVSQTGRATL GVRLIKVDDG AQVASITAVP KANDEDEEAT DEKEPVEEN
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