| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0005 |
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| Symbol | |
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| ID | 4438890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 4367 |
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| End bp | 6334 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639671867 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_813860 |
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| Protein GI | 116628688 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.452102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 2.3265900000000002e-23 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGAAG ATAAGAGCAA GGCAGCATTA AATAAAGCTA AAGACTTTGA AAAACGTGCT
GATACTTACA ACGCAAGTCA AATTCAAGTT TTAGGTGGAC TTGAAGCAGT TAGAAAACGC
CCAGGTATGT ATATTGGCTC AACTAGTAGC CAAGGTTTAC ACCACCTTGT TTGGGAAATT
ATTGATAATA GTATTGATGA ACGATTAGCT GGTTTTGCAA CCAAAATTGA AATTACTGTT
AATGAAGATG GCAGTGTAAC CGTTCAAGAC GATGGACGTG GTATCCCTGT CGATATTCAA
GCAAAAACCG GTCGTCCAGC CTTAGAAACT GTATTTACTG TTTTGCATGC CGGTGGTAAA
TTCGGCGGTG GCGGATACAA GGTATCTGGT GGTCTTCACG GTGTTGGTGC TTCTGTAGTA
AATGCTCTTT CAACTAAGCT TGATGTTACA GTTATGAGAG ATGGAAAGAA GTATGCAATT
TCCTTTGATC ATGGCCGTGT CGTAGGAGAA ATGAAACAAA TTGGAACAGT TCCTCTTGAA
GAACATGGAA CAATTGTTCA TTTTTACCCT GATCCAGATA TTTTTACTGA AACTACAACT
TTTGACGACA AAATCTTAAA GAACAGAATT CGTGAACTTG CTTTCTTAAA CAAAGGCTTA
AAGTTGACCT TTACTGATAA ACGTAAAGAA AGTGCTGAAA CTGATGTCTA CCACTTTGAG
GGCGGTATCA AGGAATACGT TGCCTTTTTA AATAAGGGCC AAGAAGTCCT ATTTGATGAA
CCAATTTATG TTGAAGGTAA TTACGAAGGA ATTGATGTTG AAGTTGCCTT GCAATATACC
AATGGTTATA AGACAACTTT AATGACTTTT GCTAACAACA TTCACACCTA CGAAGGCGGA
ATGCACGAAG CTGGATTTAA GACAGCTTTA ACTCGTGTAG TTAATGATTA TGCTCATAAG
GCTAAGATCC TAAAGGACAA GGACGATAAC TTATCTGGTG AGGATATTCG TGAAGGAATT
ACAGCTGTTG TTTCTGTTAA GCACCCTAAC CCTCAATTCG AAGGTCAGAC GAAGACAAAA
TTAGGAAACT CTGATGCAAG AACTGCAGTG GATCGGGCAT TTTCAGAAAC ATTTAGCCGC
TTCTTAATGG AAAATCCTTC TGTTGGTCGT AAGATTGTTG AAAAGGGTCA ACTTGCTGAA
AGAGCGAGAA CTGCTGCTAA ACGAGCTCGT GAAGTTACAC GTAAGAAGTC AGGTCTTGAA
ATTGCTAACT TGCCAGGAAA ATTAGCCGAC AACACTAGTA ATGATCCAAG TATTTCTGAA
TTATTCATTG TCGAGGGTAA CTCAGCCGGT GGATCAGCAA AACAAGGACG TTCACGTTTA
ACTCAGGCTA TTTTGCCAAT TAGAGGTAAA ATTTTGAACG TTGAAAAGGC TTCAATGGAT
CGAATTCTTG CAAATCAAGA AATTAGATCG CTCTTTACAG CTTTAGGTAC TGGATTTGGT
GCTGATTTTG ACGTGTCAAA AGCAAGATAT CACAAGTTAA TTATTATGAC AGATGCCGAT
GTTGACGGTG CTCACATTAG AACTTTGCTT TTGACTCTCT TCTACAATTA CATGCGTCCA
ATGATTGAAA AAGGCTATGT TTATATCGCT CGTCCACCTC TATACCAAGT TCGTCAAGGT
AAGATAGAGA AGTATTTAGA TACAGATGAA GAGTTACATG ATTATCTAGG TACGCTTCAG
CCAAGCCCTA AGCCGGTTGT TCAACGTTAT AAGGGACTAG GAGAAATGGA TCCAGAACAG
CTATGGGAAA CGACTATGAA CCCAGAAAAT CGTCGTTTAG ATAGAGTAAG TCCTGAATAC
GCTGAAGACG CTGATAAGGT CTTTGATCTT TTGATGGGGA ATGAAGTAGG TCCAAGACGA
GAATTTATTG AAAAGAACGC TAAATACGTT GAGAATTTAG ATGCTTAG
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| Protein sequence | MAEDKSKAAL NKAKDFEKRA DTYNASQIQV LGGLEAVRKR PGMYIGSTSS QGLHHLVWEI
IDNSIDERLA GFATKIEITV NEDGSVTVQD DGRGIPVDIQ AKTGRPALET VFTVLHAGGK
FGGGGYKVSG GLHGVGASVV NALSTKLDVT VMRDGKKYAI SFDHGRVVGE MKQIGTVPLE
EHGTIVHFYP DPDIFTETTT FDDKILKNRI RELAFLNKGL KLTFTDKRKE SAETDVYHFE
GGIKEYVAFL NKGQEVLFDE PIYVEGNYEG IDVEVALQYT NGYKTTLMTF ANNIHTYEGG
MHEAGFKTAL TRVVNDYAHK AKILKDKDDN LSGEDIREGI TAVVSVKHPN PQFEGQTKTK
LGNSDARTAV DRAFSETFSR FLMENPSVGR KIVEKGQLAE RARTAAKRAR EVTRKKSGLE
IANLPGKLAD NTSNDPSISE LFIVEGNSAG GSAKQGRSRL TQAILPIRGK ILNVEKASMD
RILANQEIRS LFTALGTGFG ADFDVSKARY HKLIIMTDAD VDGAHIRTLL LTLFYNYMRP
MIEKGYVYIA RPPLYQVRQG KIEKYLDTDE ELHDYLGTLQ PSPKPVVQRY KGLGEMDPEQ
LWETTMNPEN RRLDRVSPEY AEDADKVFDL LMGNEVGPRR EFIEKNAKYV ENLDA
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