| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1743 |
|---|
| Symbol | |
|---|
| ID | 4416350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 1664790 |
|---|
| End bp | 1665542 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639669902 |
|---|
| Product | lipopolysaccharide biosynthesis glycosyltransferase |
|---|
| Protein accession | YP_811252 |
|---|
| Protein GI | 116491708 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCTA AAATCTACGT GGCCTCTCAC AAACTTTATC AGATGCCTAG TGACCCTTTA
TATCAGCCGA TTTGGGTTGG ACACAGCAAA TCGAGCAATC CCTTTGATTT GCCGGCTGGA
TGGATTGGCG ACGATACTGG TGACAATATT AGCGACAAAA ATTCCTCTTT TAATGAATTA
ACAGCTCTTT ATTGGGCTTG GAAGAATTCT GATGCCGACA TAATCGGCCT TGTCCACTAT
CGAAGATATT TTTCGCTTAA TCACAAAAAA GGTCTTAATA ATGTTTTGAA CAGCAAACAA
CTGGGTGATC TTTTTAAAAA TAATCAAATT GTCTTGCCGA AAAAACGGAA TTACTTTATT
GAGACGAATT ATTCGCATTA TGTTCATGCC CATCATGCCG AAGCAATTAA TAAAGCTCGG
GAATTGATGA ATCCGACTTA TCAGACCAGT TACGACAAAA TAATGAAGAG AACCGACCAG
CACTTGTTTA ATATGCTGAT AATGACACAT CAACAGCTTG ATGAATATGC CAGTTGGATG
TTTAACATTT TATTCAAGCT GGAAAAAGAA ATTGACACAA GTACATATAA CCAATATGAA
AAGAGGGTTT TTGGTTTTGT TGGCGAACGT TTGTTGGATA TATTCTTGGA CGCTAATGAC
AAAAAATATG TTGAAGCCCC CTTTGTTTTT GAAGAAAAAC AGAATTGGCT TAGAAAAGGT
GCATCCTTTA TTTATCGAAA ACTCTTTCAT TAA
|
|---|
| Protein sequence | MQAKIYVASH KLYQMPSDPL YQPIWVGHSK SSNPFDLPAG WIGDDTGDNI SDKNSSFNEL
TALYWAWKNS DADIIGLVHY RRYFSLNHKK GLNNVLNSKQ LGDLFKNNQI VLPKKRNYFI
ETNYSHYVHA HHAEAINKAR ELMNPTYQTS YDKIMKRTDQ HLFNMLIMTH QQLDEYASWM
FNILFKLEKE IDTSTYNQYE KRVFGFVGER LLDIFLDAND KKYVEAPFVF EEKQNWLRKG
ASFIYRKLFH
|
|---|
| |