| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1728 |
|---|
| Symbol | |
|---|
| ID | 4416335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 1648496 |
|---|
| End bp | 1649650 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639669887 |
|---|
| Product | N-acetylglucosamine 6-phosphate deacetylase |
|---|
| Protein accession | YP_811237 |
|---|
| Protein GI | 116491693 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1820] N-acetylglucosamine-6-phosphate deacetylase |
|---|
| TIGRFAM ID | [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAT TAATTAAAAA TATTGATATC TATACTGGCG TAGGAGTCGT GAAAAACGGT
TTTCTGCGCT TTTCTAATAA AATTGAAGAA ATCGGCGAAG CGAAAGCTTT TGTTACTAAA
GGTGACGATC AAGTAATCAC TGTTCCAAAG GGGGCAATTA TCGTACCTGG TTTTATTGAT
GTCCACACCC ATGGAGGCTA TGGTTTTGAT ACGATGGATG CTGATGTCGA TGGCTTGAAT
CGTTTTATGG AAAATCTTCG AAGGGAAGGT TTGACAAGTG TTTTTCCGAC CACGATTACG
CAAACAAAAG ACAACATTAA AAAAGCTCTT GTTTCGGTTG CTGAAGCAGC AAAAAATAAT
TCAATGATCC GGGGAATCCA TTTGGAAGGT CCTTTTATTA ATGCCGACAT GAACGGGGCG
CAACCGGCCG AGTATGTGAT CAGGCCTGAT TTGGCTTTGT TTAAAAACTG GCAAAAAGAT
GCTGATGGTT TGATCAAATT AGTTACTTAC GCTCCAGAAA AATCCGGATC GGCTTTTGAA
GCCGGTTTGC ATAATATGGG TGTTGTGCTT TCGGCTGGCC ATACAAATCA ATCTTATTTC
AAAATGAATA AGGGCCAAAC CTTGGCTTCC CATGTAACTC ATTTATACAA TCGCCAGTCG
CAATTAGAAG GCCGTGAACC CGGTGTCACA GGATATGGTG TCTTAACGCC GTCTATCAAG
GTTGAAGTAA TTGCTGACGG GGTACATGTT TCTCCTGAAA TGATTAAATT GGCTTATCAG
TTGAAGGGTG CCAAAAATAT TGAAGTAATC ACTGATTCGA TGAGAGCCAA AGGCCAAAAA
GAAAATGAAG TTTCAGAATT AGGCGGTCAG AAGGTTATTG TTAAAAACGG AGCTGCTCGT
TTGGAAAACG GCCATTTGGC AGGTTCGGTC CTTAAGTATA TTTTGGCTTT CAGAAATATT
CAAAAATTCA CTGGTGCCAG CATTGAAGAG GCCGTCTTAA TGACTTCAGT AAATCAAGCG
CGAGAATTTG GCTTGAATGA TGTCGGCAGT CTGGAAGTTG GCAAACGGGC AAACTTTAAT
TTGCTGAATT CCGATCAGGA CTTATTAGAA AACTTTCTCG ACGGAGATGG TTTAAAGGCA
GTTGATCAAA AATGA
|
|---|
| Protein sequence | MAKLIKNIDI YTGVGVVKNG FLRFSNKIEE IGEAKAFVTK GDDQVITVPK GAIIVPGFID
VHTHGGYGFD TMDADVDGLN RFMENLRREG LTSVFPTTIT QTKDNIKKAL VSVAEAAKNN
SMIRGIHLEG PFINADMNGA QPAEYVIRPD LALFKNWQKD ADGLIKLVTY APEKSGSAFE
AGLHNMGVVL SAGHTNQSYF KMNKGQTLAS HVTHLYNRQS QLEGREPGVT GYGVLTPSIK
VEVIADGVHV SPEMIKLAYQ LKGAKNIEVI TDSMRAKGQK ENEVSELGGQ KVIVKNGAAR
LENGHLAGSV LKYILAFRNI QKFTGASIEE AVLMTSVNQA REFGLNDVGS LEVGKRANFN
LLNSDQDLLE NFLDGDGLKA VDQK
|
|---|
| |