Gene OEOE_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_1643 
Symbol 
ID4416666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand
Start bp1561086 
End bp1562651 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content45% 
IMG OID639669808 
Productsuperfamily II DNA/RNA helicase 
Protein accessionYP_811158 
Protein GI116491614 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000605464 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAATTTG AAGAATTTGG ACTTAGTCCA GAACTTTTGT CTGCGGTCAA AAAGCATGGT 
TACGATGAAG CAACCCCGAT TCAGGAAAAA ACAATTCCGT TGATTATACA GGGAGTTGAT
GTCATTGGCC AAGCACAGAC CGGTACAGGT AAGACGGCAG CTTTTGGTTT GCCGATTTTA
GAAGAAGTGG ATCCAAAGAA CCCACAAATC CAAGCCTTGG TTATCAGCCC AACACGCGAG
TTGGCTATGC AGACCGAAGA AGAACTCAAC AAGCTTGGTT CCGACAAACA CGTGAAAACT
CAAGTTGTTT TCGGTGGGTA TGATATTCGC CGACAGATCC ATGCTTTAAA AGAACATCCA
CAAATCCTTG TCGGTACTCC CGGACGATTG ATTGATCATT TGAATCGTCA TACGATTGAT
TTTCGCGGAG TTAAGACTTT GGTAATCGAT GAAGCCGACG AGATGCTAAA CATGGGTTTC
TTAGAAGATA TCGAAACGAT TGTTCATTAC ACGCCGGATG ATCGTCAAAC TTTACTTTTT
TCTGCAACGA TGCCTGACGA CATTAAGAAA ATAGGCGTTA AATTTATGGA AGATCCCGAA
GAAGTCCACA TTGCTTCTAA GGGTCTGACT ATCGATTTGG TTGACCAATA TCTGGTTAAT
ACTCGCGAAT ATGAAAAGTT CGATGCGATG ACACGCTTAT TCGATGTCGA ACAACCTGAA
CTGGCAATTG TCTTTGGTCG GACAAAGCGT CGGGTTGACG AATTGACCAA AGCTTTGCAG
CTCCGTGGCT ATAAAGCTGC CGGAATTCAT GGCGATTTGG ATCAAGCAGC CCGTATGCGG
ACTTTACGTT CCTTTAAAAA AGGAGAATTG CAGTTCTTGG TTGCAACCGA TGTTGCGGCT
CGTGGCTTGG ATATTTCCGG AGTTACGCAT GTTTATAATT ACGATGTTCC CCAAGATCCC
GAGTCTTACG TTCACCGGAT CGGTCGTACC GGTCGTGCCG GACACCATGG TGTTTCTGTA
ACTTTTGTTG TTCGTGGTGA AATTGATTAT CTGCGGGCAA TTGAAAAATT GATCAATAAG
CGTATGGCCG CTTTAAAGCC GCCTTCGGCT GAAGAAGCGC ATATTGCCCG TCTGAAGAAC
GCCAAAGCAG AGACTTATGC TGTTTTGGGT AAAACAACTA TTGATAACGT CGAAGACGAA
GCAACAGAAA TTGCCAATCA ATACGATGCT AAGTTAATCG CAGCTGCATT GTTGCACGCT
CTGTCCAAAG ATGATGAAAG AACTCGTCCT GTCGATATCG CACAGGAAAA GCCTCTTCCG
CGTCGTCATA GTTCATCTGA CCACGGTCAT AACTTCCGTA GTGGACGCTC TAATGGCAAT
CGTGGTCGCA ATGGTCATAG CAATGGCAAC CGCGGTGGTC GTCGTGGCGG ATTTAAAGAA
GAATTTGTAA TTGATCGTGG CCATAAGCCG GTCGATCGTC GCAATCAACG AATTCAGGCA
CGTCCAAAAG GGGTTGCGAA AGCGGCTCCG AAAAAACGTG AGTTTAAAAT TGTCAAAAAG
TCATGA
 
Protein sequence
MKFEEFGLSP ELLSAVKKHG YDEATPIQEK TIPLIIQGVD VIGQAQTGTG KTAAFGLPIL 
EEVDPKNPQI QALVISPTRE LAMQTEEELN KLGSDKHVKT QVVFGGYDIR RQIHALKEHP
QILVGTPGRL IDHLNRHTID FRGVKTLVID EADEMLNMGF LEDIETIVHY TPDDRQTLLF
SATMPDDIKK IGVKFMEDPE EVHIASKGLT IDLVDQYLVN TREYEKFDAM TRLFDVEQPE
LAIVFGRTKR RVDELTKALQ LRGYKAAGIH GDLDQAARMR TLRSFKKGEL QFLVATDVAA
RGLDISGVTH VYNYDVPQDP ESYVHRIGRT GRAGHHGVSV TFVVRGEIDY LRAIEKLINK
RMAALKPPSA EEAHIARLKN AKAETYAVLG KTTIDNVEDE ATEIANQYDA KLIAAALLHA
LSKDDERTRP VDIAQEKPLP RRHSSSDHGH NFRSGRSNGN RGRNGHSNGN RGGRRGGFKE
EFVIDRGHKP VDRRNQRIQA RPKGVAKAAP KKREFKIVKK S