| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1633 |
|---|
| Symbol | |
|---|
| ID | 4416151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 1550875 |
|---|
| End bp | 1551738 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639669798 |
|---|
| Product | amino acid ABC transporter periplasmic protein |
|---|
| Protein accession | YP_811149 |
|---|
| Protein GI | 116491605 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAGG CAAAAAAGAG AAAGATTGGG ATAATTTCAT CCATAATTTT GACCTTGTTA
ATTATTTTTG GCGTGGTTTC GGCATCCGCC CTTGCTGAAA ACAATTCTAA ACATGTCGAT
ACTTGGGAAC GTGTTAAACG ACTTGGCAAA ATTCGCTGGG GAGTAAAGGC TGACACAAAA
TTATTCGGTT TAATGGATAC TAAAACCGGC CAACCGGAGG GATTTGATGT TGACATTGCC
AAAGCCTTGA CGGTTCAGCT TTCAAAGCAA TCCGGTGTGC CGATGCAGGC TGATTTTACG
ATTGTTACTT CAAATACCCG TATTCAGCTT TTAAAAAATG CGAACATTGA TGGTTTTATT
GCAACGGCGA CAATTACTCC GGAAAGAGAA AAAGTAATTG ATTTTTCTAA TTCCTACTTC
AAAGCCGGGC AATCGATACT TGTTAAAAAA GGTTCTGGAA TAAAGTCGAT TAAAGATTTG
AATAATTCCA AATCAACCAT TATTGGTGTC GTTGGTTCTA ATTCTGTTAT TAATGTTAAA
AAGTTTGCTC CGAAAGCGAA AGTTCTTGCT TTAGGGGATT ATGGACAGGC TATGGCTGCT
TTGAAAGCTG GTCAAGGTCA GGCGCTTACG ACTGATAACG GAATACTTTA TGGTCTTGCA
ACGGAAAATC CTGGTTATAC AGTCGTTGGC GGCACTTTTA CATCGGAGCC ATATGGAGTC
GCTTTTGATA ATAATCAGCC GGAGATGGTT AAACAGACCA ATAAAGCTTT AAAAGCAATT
ATTGCAAATG GAACCTATAA TAAATTAATT AGAAAGTGGT TCCGGGGTGT TCCCGGACTG
GATTGGAGGT CGCTTGAAAA ATGA
|
|---|
| Protein sequence | MEKAKKRKIG IISSIILTLL IIFGVVSASA LAENNSKHVD TWERVKRLGK IRWGVKADTK
LFGLMDTKTG QPEGFDVDIA KALTVQLSKQ SGVPMQADFT IVTSNTRIQL LKNANIDGFI
ATATITPERE KVIDFSNSYF KAGQSILVKK GSGIKSIKDL NNSKSTIIGV VGSNSVINVK
KFAPKAKVLA LGDYGQAMAA LKAGQGQALT TDNGILYGLA TENPGYTVVG GTFTSEPYGV
AFDNNQPEMV KQTNKALKAI IANGTYNKLI RKWFRGVPGL DWRSLEK
|
|---|
| |